Protein–RNA interactions for Protein: P20664

Prim1, DNA primase small subunit, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prim1P20664 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Prim1P20664 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Prim1P20664 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prim1P20664 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prim1P20664 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Prim1P20664 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prim1P20664 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Prim1P20664 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prim1P20664 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prim1P20664 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prim1P20664 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prim1P20664 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prim1P20664 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Prim1P20664 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prim1P20664 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prim1P20664 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC20.85■□□□□ 0.93
Prim1P20664 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prim1P20664 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prim1P20664 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Prim1P20664 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
Prim1P20664 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prim1P20664 Gm25745-201ENSMUST00000174945 133 ntBASIC20.85■□□□□ 0.93
Prim1P20664 Gm7507-201ENSMUST00000183053 1008 ntBASIC20.85■□□□□ 0.93
Prim1P20664 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC20.85■□□□□ 0.93
Prim1P20664 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC20.85■□□□□ 0.93
Prim1P20664 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prim1P20664 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Prim1P20664 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Prim1P20664 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prim1P20664 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prim1P20664 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prim1P20664 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Prim1P20664 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prim1P20664 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prim1P20664 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prim1P20664 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prim1P20664 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prim1P20664 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Prim1P20664 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Prim1P20664 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC20.84■□□□□ 0.93
Prim1P20664 Gm7506-201ENSMUST00000207758 815 ntBASIC20.84■□□□□ 0.93
Prim1P20664 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC20.84■□□□□ 0.93
Prim1P20664 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prim1P20664 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prim1P20664 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prim1P20664 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Prim1P20664 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Prim1P20664 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prim1P20664 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prim1P20664 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prim1P20664 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Prim1P20664 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Prim1P20664 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Prim1P20664 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Prim1P20664 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Prim1P20664 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Prim1P20664 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Prim1P20664 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Prim1P20664 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC20.83■□□□□ 0.93
Prim1P20664 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Prim1P20664 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Prim1P20664 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Prim1P20664 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Prim1P20664 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Prim1P20664 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Prim1P20664 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Prim1P20664 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prim1P20664 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Prim1P20664 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Prim1P20664 Gm1818-201ENSMUST00000169406 1184 ntBASIC20.82■□□□□ 0.92
Prim1P20664 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prim1P20664 Gm8349-201ENSMUST00000182720 1003 ntBASIC20.82■□□□□ 0.92
Prim1P20664 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prim1P20664 AC127349.1-201ENSMUST00000224590 266 ntBASIC20.82■□□□□ 0.92
Prim1P20664 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prim1P20664 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prim1P20664 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prim1P20664 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prim1P20664 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Prim1P20664 Gm8839-201ENSMUST00000121279 1645 ntBASIC20.82■□□□□ 0.92
Prim1P20664 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Prim1P20664 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prim1P20664 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Prim1P20664 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prim1P20664 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prim1P20664 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Prim1P20664 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prim1P20664 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prim1P20664 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prim1P20664 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Prim1P20664 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC20.81■□□□□ 0.92
Prim1P20664 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC20.81■□□□□ 0.92
Prim1P20664 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Prim1P20664 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
Prim1P20664 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
Prim1P20664 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Prim1P20664 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Prim1P20664 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prim1P20664 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prim1P20664 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms