Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf9P20334 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf9P20334 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf9P20334 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf9P20334 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf9P20334 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf9P20334 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Tnfrsf9P20334 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf9P20334 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf9P20334 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf9P20334 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf9P20334 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf9P20334 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf9P20334 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf9P20334 Gm37374-201ENSMUST00000194954 1829 ntBASIC13.4□□□□□ -0.26
Tnfrsf9P20334 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf9P20334 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Tnfrsf9P20334 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf9P20334 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf9P20334 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf9P20334 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf9P20334 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf9P20334 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf9P20334 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC13.4□□□□□ -0.27
Tnfrsf9P20334 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Tnfrsf9P20334 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf9P20334 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf9P20334 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf9P20334 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Tnfrsf9P20334 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.38□□□□□ -0.27
Tnfrsf9P20334 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf9P20334 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf9P20334 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf9P20334 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf9P20334 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.38□□□□□ -0.27
Tnfrsf9P20334 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf9P20334 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.38□□□□□ -0.27
Tnfrsf9P20334 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf9P20334 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf9P20334 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf9P20334 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf9P20334 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Tnfrsf9P20334 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.38□□□□□ -0.27
Tnfrsf9P20334 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf9P20334 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf9P20334 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf9P20334 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf9P20334 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf9P20334 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf9P20334 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf9P20334 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf9P20334 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf9P20334 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Tnfrsf9P20334 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf9P20334 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.38□□□□□ -0.27
Tnfrsf9P20334 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf9P20334 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf9P20334 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf9P20334 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf9P20334 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf9P20334 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Tnfrsf9P20334 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf9P20334 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf9P20334 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms