Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Cxcl1P12850 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl1P12850 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.65□□□□□ -0.22
Cxcl1P12850 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl1P12850 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Cxcl1P12850 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl1P12850 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl1P12850 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl1P12850 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl1P12850 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cxcl1P12850 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl1P12850 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl1P12850 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.65□□□□□ -0.22
Cxcl1P12850 Gm12085-201ENSMUST00000119263 940 ntBASIC13.65□□□□□ -0.22
Cxcl1P12850 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.65□□□□□ -0.22
Cxcl1P12850 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.65□□□□□ -0.22
Cxcl1P12850 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.65□□□□□ -0.22
Cxcl1P12850 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl1P12850 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Cxcl1P12850 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl1P12850 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl1P12850 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl1P12850 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl1P12850 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl1P12850 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cxcl1P12850 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl1P12850 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Cxcl1P12850 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Cxcl1P12850 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Cxcl1P12850 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.23
Cxcl1P12850 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl1P12850 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl1P12850 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl1P12850 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cxcl1P12850 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl1P12850 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.64□□□□□ -0.23
Cxcl1P12850 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl1P12850 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Cxcl1P12850 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl1P12850 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl1P12850 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl1P12850 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.64□□□□□ -0.23
Cxcl1P12850 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl1P12850 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl1P12850 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl1P12850 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl1P12850 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl1P12850 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl1P12850 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl1P12850 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl1P12850 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.64□□□□□ -0.23
Cxcl1P12850 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl1P12850 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl1P12850 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl1P12850 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl1P12850 Gm15378-201ENSMUST00000121894 207 ntBASIC13.64□□□□□ -0.23
Cxcl1P12850 Gm38027-201ENSMUST00000192315 235 ntBASIC13.64□□□□□ -0.23
Cxcl1P12850 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl1P12850 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Cxcl1P12850 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl1P12850 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl1P12850 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl1P12850 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl1P12850 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cxcl1P12850 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Cxcl1P12850 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl1P12850 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl1P12850 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl1P12850 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl1P12850 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl1P12850 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl1P12850 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl1P12850 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl1P12850 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl1P12850 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl1P12850 Gm37856-201ENSMUST00000191634 999 ntBASIC13.63□□□□□ -0.23
Cxcl1P12850 Trmt13-210ENSMUST00000198454 880 ntBASIC13.63□□□□□ -0.23
Cxcl1P12850 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Cxcl1P12850 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cxcl1P12850 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl1P12850 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl1P12850 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl1P12850 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.63□□□□□ -0.23
Cxcl1P12850 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl1P12850 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl1P12850 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl1P12850 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl1P12850 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl1P12850 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl1P12850 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl1P12850 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Cxcl1P12850 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl1P12850 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cxcl1P12850 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl1P12850 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl1P12850 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl1P12850 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl1P12850 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl1P12850 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl1P12850 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms