Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gm15590-201ENSMUST00000078419 552 ntBASIC14.53□□□□□ -0.08
Ccl3P10855 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl3P10855 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Ccl3P10855 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl3P10855 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl3P10855 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Ccl3P10855 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccl3P10855 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccl3P10855 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ccl3P10855 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Ccl3P10855 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.52□□□□□ -0.08
Ccl3P10855 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccl3P10855 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccl3P10855 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ccl3P10855 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.52□□□□□ -0.09
Ccl3P10855 Gm6089-201ENSMUST00000197666 938 ntBASIC14.52□□□□□ -0.09
Ccl3P10855 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.52□□□□□ -0.09
Ccl3P10855 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl3P10855 AV026068-213ENSMUST00000223675 1171 ntBASIC14.52□□□□□ -0.09
Ccl3P10855 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl3P10855 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl3P10855 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl3P10855 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl3P10855 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl3P10855 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl3P10855 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl3P10855 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl3P10855 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl3P10855 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl3P10855 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.51□□□□□ -0.09
Ccl3P10855 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl3P10855 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl3P10855 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ccl3P10855 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Ccl3P10855 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl3P10855 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ccl3P10855 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl3P10855 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl3P10855 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl3P10855 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.51□□□□□ -0.09
Ccl3P10855 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl3P10855 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.51□□□□□ -0.09
Ccl3P10855 Gm6550-201ENSMUST00000187574 993 ntBASIC14.51□□□□□ -0.09
Ccl3P10855 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.51□□□□□ -0.09
Ccl3P10855 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.51□□□□□ -0.09
Ccl3P10855 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.51□□□□□ -0.09
Ccl3P10855 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl3P10855 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Ccl3P10855 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Ccl3P10855 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.51□□□□□ -0.09
Ccl3P10855 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl3P10855 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl3P10855 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Ccl3P10855 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl3P10855 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl3P10855 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl3P10855 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.5□□□□□ -0.09
Ccl3P10855 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Ccl3P10855 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl3P10855 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl3P10855 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl3P10855 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl3P10855 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl3P10855 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl3P10855 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl3P10855 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.5□□□□□ -0.09
Ccl3P10855 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Ccl3P10855 Gm12260-201ENSMUST00000122447 411 ntBASIC14.5□□□□□ -0.09
Ccl3P10855 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.5□□□□□ -0.09
Ccl3P10855 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl3P10855 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl3P10855 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.5□□□□□ -0.09
Ccl3P10855 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.5□□□□□ -0.09
Ccl3P10855 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Ccl3P10855 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl3P10855 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.5□□□□□ -0.09
Ccl3P10855 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.5□□□□□ -0.09
Ccl3P10855 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ccl3P10855 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ccl3P10855 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.5□□□□□ -0.09
Ccl3P10855 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl3P10855 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl3P10855 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl3P10855 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl3P10855 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl3P10855 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl3P10855 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl3P10855 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ccl3P10855 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl3P10855 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl3P10855 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl3P10855 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl3P10855 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl3P10855 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ccl3P10855 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl3P10855 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.49□□□□□ -0.09
Ccl3P10855 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.49□□□□□ -0.09
Ccl3P10855 Gm11780-201ENSMUST00000136880 516 ntBASIC14.49□□□□□ -0.09
Ccl3P10855 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl3P10855 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms