Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ly6c1P0CW02 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ly6c1P0CW02 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ly6c1P0CW02 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ly6c1P0CW02 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ly6c1P0CW02 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ly6c1P0CW02 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.74□□□□□ -0.21
Ly6c1P0CW02 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ly6c1P0CW02 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ly6c1P0CW02 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Ly6c1P0CW02 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ly6c1P0CW02 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Ly6c1P0CW02 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ly6c1P0CW02 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ly6c1P0CW02 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13.73□□□□□ -0.21
Ly6c1P0CW02 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ly6c1P0CW02 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ly6c1P0CW02 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.73□□□□□ -0.21
Ly6c1P0CW02 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ly6c1P0CW02 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ly6c1P0CW02 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ly6c1P0CW02 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Ly6c1P0CW02 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ly6c1P0CW02 Ank2-226ENSMUST00000189368 339 ntBASIC13.73□□□□□ -0.21
Ly6c1P0CW02 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ly6c1P0CW02 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Ly6c1P0CW02 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ly6c1P0CW02 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ly6c1P0CW02 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ly6c1P0CW02 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ly6c1P0CW02 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ly6c1P0CW02 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ly6c1P0CW02 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ly6c1P0CW02 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ly6c1P0CW02 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
Ly6c1P0CW02 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ly6c1P0CW02 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ly6c1P0CW02 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ly6c1P0CW02 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ly6c1P0CW02 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ly6c1P0CW02 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ly6c1P0CW02 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Ly6c1P0CW02 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ly6c1P0CW02 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ly6c1P0CW02 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ly6c1P0CW02 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.72□□□□□ -0.21
Ly6c1P0CW02 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ly6c1P0CW02 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.72□□□□□ -0.21
Ly6c1P0CW02 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ly6c1P0CW02 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.72□□□□□ -0.21
Ly6c1P0CW02 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ly6c1P0CW02 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ly6c1P0CW02 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ly6c1P0CW02 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ly6c1P0CW02 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ly6c1P0CW02 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ly6c1P0CW02 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Ly6c1P0CW02 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ly6c1P0CW02 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ly6c1P0CW02 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ly6c1P0CW02 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.71□□□□□ -0.21
Ly6c1P0CW02 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ly6c1P0CW02 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.71□□□□□ -0.21
Ly6c1P0CW02 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.71□□□□□ -0.21
Ly6c1P0CW02 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ly6c1P0CW02 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ly6c1P0CW02 Gm13216-201ENSMUST00000117145 591 ntBASIC13.71□□□□□ -0.21
Ly6c1P0CW02 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Ly6c1P0CW02 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ly6c1P0CW02 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.71□□□□□ -0.21
Ly6c1P0CW02 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ly6c1P0CW02 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ly6c1P0CW02 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.71□□□□□ -0.21
Ly6c1P0CW02 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ly6c1P0CW02 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ly6c1P0CW02 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ly6c1P0CW02 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ly6c1P0CW02 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Ly6c1P0CW02 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ly6c1P0CW02 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
Ly6c1P0CW02 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ly6c1P0CW02 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ly6c1P0CW02 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ly6c1P0CW02 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ly6c1P0CW02 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ly6c1P0CW02 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ly6c1P0CW02 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ly6c1P0CW02 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ly6c1P0CW02 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ly6c1P0CW02 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Ly6c1P0CW02 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ly6c1P0CW02 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.7□□□□□ -0.22
Ly6c1P0CW02 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ly6c1P0CW02 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.7□□□□□ -0.22
Ly6c1P0CW02 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ly6c1P0CW02 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.7□□□□□ -0.22
Ly6c1P0CW02 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.7□□□□□ -0.22
Ly6c1P0CW02 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Ly6c1P0CW02 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.7□□□□□ -0.22
Ly6c1P0CW02 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms