Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smim1P0C8K7 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smim1P0C8K7 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smim1P0C8K7 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smim1P0C8K7 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Smim1P0C8K7 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smim1P0C8K7 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smim1P0C8K7 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smim1P0C8K7 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Smim1P0C8K7 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Smim1P0C8K7 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smim1P0C8K7 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smim1P0C8K7 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smim1P0C8K7 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smim1P0C8K7 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smim1P0C8K7 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Smim1P0C8K7 Gm13534-201ENSMUST00000121169 513 ntBASIC11.39□□□□□ -0.59
Smim1P0C8K7 Gm14281-201ENSMUST00000121700 1294 ntBASIC11.39□□□□□ -0.59
Smim1P0C8K7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC11.39□□□□□ -0.59
Smim1P0C8K7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Smim1P0C8K7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smim1P0C8K7 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Smim1P0C8K7 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smim1P0C8K7 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Smim1P0C8K7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smim1P0C8K7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC11.39□□□□□ -0.59
Smim1P0C8K7 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smim1P0C8K7 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smim1P0C8K7 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Smim1P0C8K7 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Smim1P0C8K7 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Smim1P0C8K7 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Smim1P0C8K7 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Smim1P0C8K7 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smim1P0C8K7 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC11.39□□□□□ -0.59
Smim1P0C8K7 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smim1P0C8K7 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smim1P0C8K7 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC11.39□□□□□ -0.59
Smim1P0C8K7 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Smim1P0C8K7 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smim1P0C8K7 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smim1P0C8K7 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smim1P0C8K7 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC11.38□□□□□ -0.59
Smim1P0C8K7 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smim1P0C8K7 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Smim1P0C8K7 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Smim1P0C8K7 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smim1P0C8K7 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smim1P0C8K7 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smim1P0C8K7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smim1P0C8K7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC11.38□□□□□ -0.59
Smim1P0C8K7 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smim1P0C8K7 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smim1P0C8K7 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smim1P0C8K7 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smim1P0C8K7 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC11.38□□□□□ -0.59
Smim1P0C8K7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Smim1P0C8K7 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smim1P0C8K7 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smim1P0C8K7 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC11.38□□□□□ -0.59
Smim1P0C8K7 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Smim1P0C8K7 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smim1P0C8K7 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smim1P0C8K7 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smim1P0C8K7 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Smim1P0C8K7 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smim1P0C8K7 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC11.38□□□□□ -0.59
Smim1P0C8K7 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC11.38□□□□□ -0.59
Smim1P0C8K7 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smim1P0C8K7 Gm37305-201ENSMUST00000195714 4279 ntBASIC11.38□□□□□ -0.59
Smim1P0C8K7 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Smim1P0C8K7 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smim1P0C8K7 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smim1P0C8K7 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smim1P0C8K7 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Smim1P0C8K7 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smim1P0C8K7 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smim1P0C8K7 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC11.37□□□□□ -0.59
Smim1P0C8K7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smim1P0C8K7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Smim1P0C8K7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Smim1P0C8K7 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC11.37□□□□□ -0.59
Smim1P0C8K7 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smim1P0C8K7 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Smim1P0C8K7 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smim1P0C8K7 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smim1P0C8K7 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smim1P0C8K7 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smim1P0C8K7 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smim1P0C8K7 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smim1P0C8K7 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Smim1P0C8K7 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smim1P0C8K7 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smim1P0C8K7 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Smim1P0C8K7 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smim1P0C8K7 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smim1P0C8K7 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Smim1P0C8K7 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Smim1P0C8K7 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Smim1P0C8K7 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms