Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TnfP06804 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.45■□□□□ 0.38
TnfP06804 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TnfP06804 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TnfP06804 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TnfP06804 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TnfP06804 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TnfP06804 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TnfP06804 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TnfP06804 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.44■□□□□ 0.38
TnfP06804 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TnfP06804 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.44■□□□□ 0.38
TnfP06804 Gm12644-201ENSMUST00000119935 606 ntBASIC17.44■□□□□ 0.38
TnfP06804 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.44■□□□□ 0.38
TnfP06804 Gm44454-201ENSMUST00000198541 138 ntBASIC17.44■□□□□ 0.38
TnfP06804 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.44■□□□□ 0.38
TnfP06804 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.44■□□□□ 0.38
TnfP06804 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TnfP06804 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
TnfP06804 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TnfP06804 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TnfP06804 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TnfP06804 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TnfP06804 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.44■□□□□ 0.38
TnfP06804 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TnfP06804 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TnfP06804 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TnfP06804 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TnfP06804 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TnfP06804 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TnfP06804 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.43■□□□□ 0.38
TnfP06804 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TnfP06804 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TnfP06804 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TnfP06804 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TnfP06804 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.43■□□□□ 0.38
TnfP06804 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.43■□□□□ 0.38
TnfP06804 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.43■□□□□ 0.38
TnfP06804 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.43■□□□□ 0.38
TnfP06804 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TnfP06804 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TnfP06804 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TnfP06804 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TnfP06804 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TnfP06804 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.43■□□□□ 0.38
TnfP06804 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TnfP06804 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TnfP06804 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TnfP06804 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TnfP06804 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TnfP06804 Gm27867-201ENSMUST00000184778 125 ntBASIC17.42■□□□□ 0.38
TnfP06804 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TnfP06804 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.42■□□□□ 0.38
TnfP06804 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.42■□□□□ 0.38
TnfP06804 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TnfP06804 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TnfP06804 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TnfP06804 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TnfP06804 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
TnfP06804 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TnfP06804 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TnfP06804 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TnfP06804 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TnfP06804 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TnfP06804 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.41■□□□□ 0.38
TnfP06804 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TnfP06804 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TnfP06804 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TnfP06804 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TnfP06804 Gm15165-201ENSMUST00000118140 502 ntBASIC17.41■□□□□ 0.38
TnfP06804 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TnfP06804 Gm36967-201ENSMUST00000193814 266 ntBASIC17.41■□□□□ 0.38
TnfP06804 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
TnfP06804 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
TnfP06804 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TnfP06804 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TnfP06804 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TnfP06804 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TnfP06804 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TnfP06804 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TnfP06804 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TnfP06804 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
TnfP06804 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TnfP06804 Gm28659-201ENSMUST00000188013 759 ntBASIC17.4■□□□□ 0.38
TnfP06804 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.4■□□□□ 0.38
TnfP06804 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.4■□□□□ 0.38
TnfP06804 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.4■□□□□ 0.38
TnfP06804 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
TnfP06804 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.4■□□□□ 0.38
TnfP06804 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TnfP06804 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TnfP06804 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TnfP06804 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TnfP06804 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TnfP06804 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
TnfP06804 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
TnfP06804 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TnfP06804 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TnfP06804 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TnfP06804 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms