Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04940 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04940 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
P04940 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
P04940 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04940 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
P04940 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
P04940 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04940 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
P04940 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.35□□□□□ -0.27
P04940 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P04940 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P04940 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
P04940 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
P04940 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.35□□□□□ -0.27
P04940 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P04940 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P04940 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P04940 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P04940 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
P04940 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P04940 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.35□□□□□ -0.27
P04940 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
P04940 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P04940 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
P04940 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.35□□□□□ -0.27
P04940 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.35□□□□□ -0.27
P04940 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P04940 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
P04940 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
P04940 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P04940 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P04940 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
P04940 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
P04940 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
P04940 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P04940 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
P04940 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P04940 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
P04940 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
P04940 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
P04940 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
P04940 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P04940 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P04940 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
P04940 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
P04940 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P04940 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.34□□□□□ -0.27
P04940 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.34□□□□□ -0.27
P04940 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.34□□□□□ -0.27
P04940 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P04940 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
P04940 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
P04940 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P04940 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
P04940 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P04940 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P04940 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
P04940 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
P04940 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
P04940 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P04940 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
P04940 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P04940 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
P04940 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P04940 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.34□□□□□ -0.27
P04940 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
P04940 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
P04940 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
P04940 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
P04940 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
P04940 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
P04940 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC13.33□□□□□ -0.28
P04940 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P04940 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P04940 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P04940 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
P04940 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
P04940 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
P04940 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
P04940 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
P04940 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.33□□□□□ -0.28
P04940 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
P04940 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.33□□□□□ -0.28
P04940 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
P04940 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.33□□□□□ -0.28
P04940 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
P04940 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.33□□□□□ -0.28
P04940 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
P04940 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.33□□□□□ -0.28
P04940 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.33□□□□□ -0.28
P04940 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
P04940 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.33□□□□□ -0.28
P04940 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
P04940 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P04940 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.33□□□□□ -0.28
P04940 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
P04940 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P04940 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
P04940 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms