Protein–RNA interactions for Protein: P01878

Ig alpha chain C region, mousemouse

Predictions only

Length 344 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01878 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.89■□□□□ 0.3
P01878 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.89■□□□□ 0.29
P01878 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P01878 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.89■□□□□ 0.29
P01878 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
P01878 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
P01878 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.89■□□□□ 0.29
P01878 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.89■□□□□ 0.29
P01878 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.89■□□□□ 0.29
P01878 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.89■□□□□ 0.29
P01878 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
P01878 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.89■□□□□ 0.29
P01878 Gm8655-201ENSMUST00000221159 852 ntBASIC16.89■□□□□ 0.29
P01878 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P01878 Gm15590-201ENSMUST00000078419 552 ntBASIC16.89■□□□□ 0.29
P01878 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P01878 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
P01878 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P01878 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.89■□□□□ 0.29
P01878 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P01878 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P01878 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
P01878 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P01878 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
P01878 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P01878 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P01878 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
P01878 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
P01878 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
P01878 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
P01878 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
P01878 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
P01878 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
P01878 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
P01878 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
P01878 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
P01878 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.88■□□□□ 0.29
P01878 Gm6550-201ENSMUST00000187574 993 ntBASIC16.88■□□□□ 0.29
P01878 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.88■□□□□ 0.29
P01878 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
P01878 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.88■□□□□ 0.29
P01878 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
P01878 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
P01878 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P01878 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P01878 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.87■□□□□ 0.29
P01878 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P01878 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
P01878 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.87■□□□□ 0.29
P01878 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P01878 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
P01878 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.87■□□□□ 0.29
P01878 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
P01878 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.87■□□□□ 0.29
P01878 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
P01878 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.87■□□□□ 0.29
P01878 AV026068-213ENSMUST00000223675 1171 ntBASIC16.87■□□□□ 0.29
P01878 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
P01878 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
P01878 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
P01878 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
P01878 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
P01878 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P01878 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P01878 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P01878 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
P01878 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
P01878 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
P01878 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P01878 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
P01878 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.86■□□□□ 0.29
P01878 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.86■□□□□ 0.29
P01878 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
P01878 Gm8000-201ENSMUST00000188378 592 ntBASIC16.86■□□□□ 0.29
P01878 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.86■□□□□ 0.29
P01878 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.86■□□□□ 0.29
P01878 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
P01878 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P01878 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P01878 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.86■□□□□ 0.29
P01878 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
P01878 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
P01878 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P01878 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
P01878 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
P01878 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
P01878 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
P01878 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
P01878 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
P01878 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
P01878 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.85■□□□□ 0.29
P01878 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.85■□□□□ 0.29
P01878 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
P01878 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
P01878 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
P01878 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
P01878 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.85■□□□□ 0.29
P01878 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
P01878 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
P01878 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms