Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TcraP01849 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.07□□□□□ -0.48
TcraP01849 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TcraP01849 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TcraP01849 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TcraP01849 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TcraP01849 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TcraP01849 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TcraP01849 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TcraP01849 Tfap2a-209ENSMUST00000225180 1828 ntBASIC12.07□□□□□ -0.48
TcraP01849 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TcraP01849 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
TcraP01849 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TcraP01849 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TcraP01849 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TcraP01849 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
TcraP01849 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
TcraP01849 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
TcraP01849 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TcraP01849 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
TcraP01849 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
TcraP01849 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TcraP01849 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TcraP01849 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.06□□□□□ -0.48
TcraP01849 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
TcraP01849 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
TcraP01849 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TcraP01849 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC12.06□□□□□ -0.48
TcraP01849 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TcraP01849 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TcraP01849 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TcraP01849 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
TcraP01849 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TcraP01849 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TcraP01849 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TcraP01849 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
TcraP01849 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
TcraP01849 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TcraP01849 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
TcraP01849 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
TcraP01849 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TcraP01849 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TcraP01849 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.05□□□□□ -0.48
TcraP01849 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
TcraP01849 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
TcraP01849 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TcraP01849 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TcraP01849 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC12.05□□□□□ -0.48
TcraP01849 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TcraP01849 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TcraP01849 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TcraP01849 Gm6365-201ENSMUST00000054711 744 ntBASIC12.05□□□□□ -0.48
TcraP01849 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TcraP01849 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
TcraP01849 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC12.05□□□□□ -0.48
TcraP01849 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TcraP01849 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TcraP01849 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
TcraP01849 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TcraP01849 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
TcraP01849 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TcraP01849 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TcraP01849 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TcraP01849 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TcraP01849 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
TcraP01849 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC12.05□□□□□ -0.48
TcraP01849 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TcraP01849 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
TcraP01849 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TcraP01849 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TcraP01849 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.04□□□□□ -0.48
TcraP01849 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TcraP01849 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TcraP01849 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TcraP01849 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TcraP01849 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TcraP01849 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TcraP01849 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC12.04□□□□□ -0.48
TcraP01849 Gm8495-201ENSMUST00000188740 694 ntBASIC12.04□□□□□ -0.48
TcraP01849 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TcraP01849 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.04□□□□□ -0.48
TcraP01849 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TcraP01849 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TcraP01849 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
TcraP01849 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TcraP01849 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TcraP01849 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TcraP01849 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
TcraP01849 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TcraP01849 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TcraP01849 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC12.04□□□□□ -0.48
TcraP01849 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TcraP01849 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TcraP01849 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TcraP01849 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TcraP01849 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TcraP01849 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
TcraP01849 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TcraP01849 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
TcraP01849 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms