Protein–RNA interactions for Protein: P01810

Ig heavy chain V region J539, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01810 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
P01810 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
P01810 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.44■□□□□ 0.22
P01810 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
P01810 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.44■□□□□ 0.22
P01810 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.44■□□□□ 0.22
P01810 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.44■□□□□ 0.22
P01810 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
P01810 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
P01810 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
P01810 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
P01810 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.44■□□□□ 0.22
P01810 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
P01810 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
P01810 Haglr-201ENSMUST00000100000 2085 ntBASIC16.44■□□□□ 0.22
P01810 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
P01810 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
P01810 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
P01810 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.44■□□□□ 0.22
P01810 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
P01810 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
P01810 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
P01810 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
P01810 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
P01810 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
P01810 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
P01810 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
P01810 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
P01810 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
P01810 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
P01810 Gm9103-201ENSMUST00000119371 405 ntBASIC16.43■□□□□ 0.22
P01810 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.43■□□□□ 0.22
P01810 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.43■□□□□ 0.22
P01810 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
P01810 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
P01810 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
P01810 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
P01810 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
P01810 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
P01810 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
P01810 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
P01810 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.43■□□□□ 0.22
P01810 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
P01810 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
P01810 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
P01810 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
P01810 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
P01810 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
P01810 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
P01810 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
P01810 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.42■□□□□ 0.22
P01810 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.42■□□□□ 0.22
P01810 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.42■□□□□ 0.22
P01810 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
P01810 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.42■□□□□ 0.22
P01810 Gm28033-201ENSMUST00000184224 96 ntBASIC16.42■□□□□ 0.22
P01810 Gm18669-201ENSMUST00000216049 778 ntBASIC16.42■□□□□ 0.22
P01810 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.42■□□□□ 0.22
P01810 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
P01810 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
P01810 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
P01810 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
P01810 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
P01810 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
P01810 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
P01810 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
P01810 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.42■□□□□ 0.22
P01810 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
P01810 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
P01810 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
P01810 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
P01810 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
P01810 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
P01810 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
P01810 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
P01810 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
P01810 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
P01810 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.41■□□□□ 0.22
P01810 Gm13312-201ENSMUST00000119631 718 ntBASIC16.41■□□□□ 0.22
P01810 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
P01810 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
P01810 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.41■□□□□ 0.22
P01810 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
P01810 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.41■□□□□ 0.22
P01810 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
P01810 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
P01810 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
P01810 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
P01810 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
P01810 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
P01810 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
P01810 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
P01810 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
P01810 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
P01810 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
P01810 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
P01810 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
P01810 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
P01810 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
P01810 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms