Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vti1aO89116 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vti1aO89116 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vti1aO89116 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.73■□□□□ 0.43
Vti1aO89116 Phf7-203ENSMUST00000226565 1971 ntBASIC17.73■□□□□ 0.43
Vti1aO89116 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.73■□□□□ 0.43
Vti1aO89116 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vti1aO89116 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vti1aO89116 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vti1aO89116 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vti1aO89116 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vti1aO89116 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vti1aO89116 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vti1aO89116 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vti1aO89116 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vti1aO89116 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vti1aO89116 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vti1aO89116 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.72■□□□□ 0.43
Vti1aO89116 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.72■□□□□ 0.43
Vti1aO89116 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Vti1aO89116 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Vti1aO89116 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.72■□□□□ 0.43
Vti1aO89116 Gm43347-201ENSMUST00000200226 580 ntBASIC17.72■□□□□ 0.43
Vti1aO89116 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.72■□□□□ 0.43
Vti1aO89116 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vti1aO89116 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.72■□□□□ 0.43
Vti1aO89116 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vti1aO89116 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Vti1aO89116 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Vti1aO89116 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vti1aO89116 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vti1aO89116 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vti1aO89116 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vti1aO89116 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vti1aO89116 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vti1aO89116 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Vti1aO89116 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vti1aO89116 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Vti1aO89116 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vti1aO89116 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Vti1aO89116 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vti1aO89116 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vti1aO89116 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vti1aO89116 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vti1aO89116 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.71■□□□□ 0.42
Vti1aO89116 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Vti1aO89116 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Vti1aO89116 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vti1aO89116 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vti1aO89116 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vti1aO89116 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Vti1aO89116 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vti1aO89116 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Vti1aO89116 Gm13186-201ENSMUST00000118031 316 ntBASIC17.7■□□□□ 0.42
Vti1aO89116 Gm12895-201ENSMUST00000122214 226 ntBASIC17.7■□□□□ 0.42
Vti1aO89116 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Vti1aO89116 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vti1aO89116 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vti1aO89116 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vti1aO89116 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Vti1aO89116 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Vti1aO89116 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vti1aO89116 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Vti1aO89116 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vti1aO89116 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vti1aO89116 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vti1aO89116 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Vti1aO89116 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.69■□□□□ 0.42
Vti1aO89116 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vti1aO89116 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vti1aO89116 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vti1aO89116 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.69■□□□□ 0.42
Vti1aO89116 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Vti1aO89116 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vti1aO89116 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.69■□□□□ 0.42
Vti1aO89116 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vti1aO89116 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vti1aO89116 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Vti1aO89116 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Vti1aO89116 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vti1aO89116 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vti1aO89116 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.68■□□□□ 0.42
Vti1aO89116 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vti1aO89116 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vti1aO89116 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vti1aO89116 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vti1aO89116 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vti1aO89116 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vti1aO89116 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vti1aO89116 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.68■□□□□ 0.42
Vti1aO89116 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Vti1aO89116 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vti1aO89116 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.68■□□□□ 0.42
Vti1aO89116 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Vti1aO89116 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vti1aO89116 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.68■□□□□ 0.42
Vti1aO89116 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Vti1aO89116 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vti1aO89116 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vti1aO89116 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms