Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf17O88472 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf17O88472 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.26■□□□□ 0.03
Tnfrsf17O88472 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.26■□□□□ 0.03
Tnfrsf17O88472 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.26■□□□□ 0.03
Tnfrsf17O88472 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.26■□□□□ 0.03
Tnfrsf17O88472 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.26■□□□□ 0.03
Tnfrsf17O88472 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.26■□□□□ 0.03
Tnfrsf17O88472 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf17O88472 Gm8655-201ENSMUST00000221159 852 ntBASIC15.26■□□□□ 0.03
Tnfrsf17O88472 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.26■□□□□ 0.03
Tnfrsf17O88472 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf17O88472 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf17O88472 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf17O88472 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf17O88472 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf17O88472 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Tnfrsf17O88472 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf17O88472 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf17O88472 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf17O88472 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Tnfrsf17O88472 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf17O88472 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf17O88472 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.25■□□□□ 0.03
Tnfrsf17O88472 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf17O88472 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf17O88472 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf17O88472 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Tnfrsf17O88472 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf17O88472 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf17O88472 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Tnfrsf17O88472 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf17O88472 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf17O88472 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf17O88472 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf17O88472 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Tnfrsf17O88472 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf17O88472 Rarb-207ENSMUST00000225921 2756 ntBASIC15.24■□□□□ 0.03
Tnfrsf17O88472 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf17O88472 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf17O88472 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf17O88472 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf17O88472 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf17O88472 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.24■□□□□ 0.03
Tnfrsf17O88472 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf17O88472 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.24■□□□□ 0.03
Tnfrsf17O88472 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.24■□□□□ 0.03
Tnfrsf17O88472 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.24■□□□□ 0.03
Tnfrsf17O88472 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Tnfrsf17O88472 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.24■□□□□ 0.03
Tnfrsf17O88472 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf17O88472 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.24■□□□□ 0.03
Tnfrsf17O88472 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.24■□□□□ 0.03
Tnfrsf17O88472 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.24■□□□□ 0.03
Tnfrsf17O88472 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf17O88472 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.24■□□□□ 0.03
Tnfrsf17O88472 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf17O88472 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Tnfrsf17O88472 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf17O88472 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf17O88472 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf17O88472 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf17O88472 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf17O88472 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf17O88472 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf17O88472 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf17O88472 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf17O88472 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf17O88472 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf17O88472 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf17O88472 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Tnfrsf17O88472 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf17O88472 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf17O88472 Gm17271-201ENSMUST00000165535 355 ntBASIC15.23■□□□□ 0.03
Tnfrsf17O88472 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Tnfrsf17O88472 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.23■□□□□ 0.03
Tnfrsf17O88472 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.23■□□□□ 0.03
Tnfrsf17O88472 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf17O88472 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Tnfrsf17O88472 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf17O88472 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf17O88472 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf17O88472 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf17O88472 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf17O88472 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf17O88472 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf17O88472 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf17O88472 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf17O88472 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf17O88472 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf17O88472 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Tnfrsf17O88472 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Tnfrsf17O88472 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf17O88472 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Tnfrsf17O88472 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.22■□□□□ 0.03
Tnfrsf17O88472 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf17O88472 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf17O88472 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Tnfrsf17O88472 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf17O88472 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms