Protein–RNA interactions for Protein: O88346

Tnnt1, Troponin T, slow skeletal muscle, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnnt1O88346 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tnnt1O88346 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Tnnt1O88346 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC21■□□□□ 0.95
Tnnt1O88346 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Tnnt1O88346 Gm43347-201ENSMUST00000200226 580 ntBASIC21■□□□□ 0.95
Tnnt1O88346 AC153889.1-201ENSMUST00000219257 330 ntBASIC21■□□□□ 0.95
Tnnt1O88346 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Tnnt1O88346 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC21■□□□□ 0.95
Tnnt1O88346 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Tnnt1O88346 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Tnnt1O88346 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tnnt1O88346 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tnnt1O88346 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC21■□□□□ 0.95
Tnnt1O88346 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Tnnt1O88346 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tnnt1O88346 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tnnt1O88346 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tnnt1O88346 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tnnt1O88346 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tnnt1O88346 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.99■□□□□ 0.95
Tnnt1O88346 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tnnt1O88346 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
Tnnt1O88346 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.99■□□□□ 0.95
Tnnt1O88346 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tnnt1O88346 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC20.99■□□□□ 0.95
Tnnt1O88346 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tnnt1O88346 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC20.99■□□□□ 0.95
Tnnt1O88346 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC20.99■□□□□ 0.95
Tnnt1O88346 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC20.99■□□□□ 0.95
Tnnt1O88346 Cmtm5-203ENSMUST00000227441 610 ntBASIC20.99■□□□□ 0.95
Tnnt1O88346 Birc2-201ENSMUST00000054878 378 ntBASIC20.99■□□□□ 0.95
Tnnt1O88346 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Tnnt1O88346 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tnnt1O88346 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tnnt1O88346 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tnnt1O88346 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tnnt1O88346 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tnnt1O88346 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tnnt1O88346 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tnnt1O88346 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tnnt1O88346 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tnnt1O88346 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tnnt1O88346 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tnnt1O88346 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tnnt1O88346 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tnnt1O88346 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tnnt1O88346 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC20.98■□□□□ 0.95
Tnnt1O88346 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tnnt1O88346 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.98■□□□□ 0.95
Tnnt1O88346 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC20.98■□□□□ 0.95
Tnnt1O88346 Gm5864-201ENSMUST00000202263 970 ntBASIC20.98■□□□□ 0.95
Tnnt1O88346 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tnnt1O88346 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tnnt1O88346 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tnnt1O88346 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tnnt1O88346 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tnnt1O88346 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tnnt1O88346 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Tnnt1O88346 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tnnt1O88346 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tnnt1O88346 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tnnt1O88346 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tnnt1O88346 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Tnnt1O88346 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Tnnt1O88346 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tnnt1O88346 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tnnt1O88346 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tnnt1O88346 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Tnnt1O88346 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC20.97■□□□□ 0.95
Tnnt1O88346 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC20.97■□□□□ 0.95
Tnnt1O88346 Gm27867-201ENSMUST00000184778 125 ntBASIC20.97■□□□□ 0.95
Tnnt1O88346 Gm27459-201ENSMUST00000184860 107 ntBASIC20.97■□□□□ 0.95
Tnnt1O88346 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC20.97■□□□□ 0.95
Tnnt1O88346 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Tnnt1O88346 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tnnt1O88346 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tnnt1O88346 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tnnt1O88346 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tnnt1O88346 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Tnnt1O88346 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Tnnt1O88346 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Tnnt1O88346 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tnnt1O88346 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tnnt1O88346 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tnnt1O88346 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Tnnt1O88346 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tnnt1O88346 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tnnt1O88346 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC20.96■□□□□ 0.95
Tnnt1O88346 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tnnt1O88346 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Tnnt1O88346 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
Tnnt1O88346 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tnnt1O88346 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tnnt1O88346 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.96■□□□□ 0.95
Tnnt1O88346 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tnnt1O88346 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Tnnt1O88346 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Tnnt1O88346 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tnnt1O88346 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Tnnt1O88346 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms