Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ttc3O88196 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Ttc3O88196 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Ttc3O88196 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ttc3O88196 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ttc3O88196 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ttc3O88196 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ttc3O88196 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.18■□□□□ 0.34
Ttc3O88196 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ttc3O88196 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ttc3O88196 Mir5131-201ENSMUST00000175426 93 ntBASIC17.18■□□□□ 0.34
Ttc3O88196 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ttc3O88196 Gm18206-201ENSMUST00000207027 926 ntBASIC17.18■□□□□ 0.34
Ttc3O88196 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Ttc3O88196 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ttc3O88196 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ttc3O88196 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ttc3O88196 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Ttc3O88196 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ttc3O88196 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ttc3O88196 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ttc3O88196 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ttc3O88196 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ttc3O88196 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ttc3O88196 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Ttc3O88196 Gm7230-201ENSMUST00000173026 815 ntBASIC17.17■□□□□ 0.34
Ttc3O88196 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ttc3O88196 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ttc3O88196 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ttc3O88196 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ttc3O88196 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.17■□□□□ 0.34
Ttc3O88196 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ttc3O88196 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ttc3O88196 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ttc3O88196 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ttc3O88196 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ttc3O88196 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ttc3O88196 Gm12350-201ENSMUST00000121208 462 ntBASIC17.17■□□□□ 0.34
Ttc3O88196 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ttc3O88196 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.17■□□□□ 0.34
Ttc3O88196 Gm9172-201ENSMUST00000212092 954 ntBASIC17.17■□□□□ 0.34
Ttc3O88196 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.17■□□□□ 0.34
Ttc3O88196 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ttc3O88196 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ttc3O88196 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ttc3O88196 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Ttc3O88196 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.16■□□□□ 0.34
Ttc3O88196 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ttc3O88196 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ttc3O88196 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ttc3O88196 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ttc3O88196 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ttc3O88196 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ttc3O88196 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Ttc3O88196 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ttc3O88196 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Ttc3O88196 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.16■□□□□ 0.34
Ttc3O88196 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Ttc3O88196 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.16■□□□□ 0.34
Ttc3O88196 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ttc3O88196 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ttc3O88196 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ttc3O88196 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ttc3O88196 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ttc3O88196 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ttc3O88196 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ttc3O88196 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ttc3O88196 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Ttc3O88196 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ttc3O88196 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ttc3O88196 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ttc3O88196 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ttc3O88196 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ttc3O88196 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ttc3O88196 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.15■□□□□ 0.34
Ttc3O88196 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.15■□□□□ 0.34
Ttc3O88196 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.15■□□□□ 0.34
Ttc3O88196 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ttc3O88196 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ttc3O88196 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ttc3O88196 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ttc3O88196 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ttc3O88196 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ttc3O88196 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ttc3O88196 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ttc3O88196 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ttc3O88196 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ttc3O88196 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ttc3O88196 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ttc3O88196 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ttc3O88196 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.34
Ttc3O88196 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Ttc3O88196 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Ttc3O88196 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ttc3O88196 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ttc3O88196 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ttc3O88196 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.14■□□□□ 0.33
Ttc3O88196 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ttc3O88196 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ttc3O88196 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms