Protein–RNA interactions for Protein: O70228

Atp9a, Probable phospholipid-transporting ATPase IIA, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp9aO70228 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atp9aO70228 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atp9aO70228 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atp9aO70228 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atp9aO70228 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atp9aO70228 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atp9aO70228 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atp9aO70228 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Atp9aO70228 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atp9aO70228 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atp9aO70228 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Atp9aO70228 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atp9aO70228 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atp9aO70228 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
Atp9aO70228 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.19■□□□□ 0.5
Atp9aO70228 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Atp9aO70228 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atp9aO70228 Gm44454-201ENSMUST00000198541 138 ntBASIC18.19■□□□□ 0.5
Atp9aO70228 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atp9aO70228 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atp9aO70228 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Atp9aO70228 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Atp9aO70228 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atp9aO70228 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atp9aO70228 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
Atp9aO70228 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Atp9aO70228 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.18■□□□□ 0.5
Atp9aO70228 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atp9aO70228 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atp9aO70228 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atp9aO70228 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Atp9aO70228 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atp9aO70228 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atp9aO70228 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atp9aO70228 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.18■□□□□ 0.5
Atp9aO70228 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Atp9aO70228 Gm12644-201ENSMUST00000119935 606 ntBASIC18.18■□□□□ 0.5
Atp9aO70228 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.18■□□□□ 0.5
Atp9aO70228 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.18■□□□□ 0.5
Atp9aO70228 Gm5864-201ENSMUST00000202263 970 ntBASIC18.18■□□□□ 0.5
Atp9aO70228 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atp9aO70228 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atp9aO70228 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Atp9aO70228 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atp9aO70228 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.18■□□□□ 0.5
Atp9aO70228 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atp9aO70228 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atp9aO70228 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atp9aO70228 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Atp9aO70228 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp9aO70228 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp9aO70228 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp9aO70228 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp9aO70228 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp9aO70228 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp9aO70228 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp9aO70228 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp9aO70228 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp9aO70228 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.17■□□□□ 0.5
Atp9aO70228 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.17■□□□□ 0.5
Atp9aO70228 Gm36967-201ENSMUST00000193814 266 ntBASIC18.17■□□□□ 0.5
Atp9aO70228 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp9aO70228 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Atp9aO70228 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Atp9aO70228 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp9aO70228 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Atp9aO70228 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp9aO70228 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp9aO70228 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp9aO70228 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp9aO70228 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.16■□□□□ 0.5
Atp9aO70228 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atp9aO70228 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atp9aO70228 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Atp9aO70228 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atp9aO70228 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Atp9aO70228 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atp9aO70228 Gm15165-201ENSMUST00000118140 502 ntBASIC18.16■□□□□ 0.5
Atp9aO70228 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atp9aO70228 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.16■□□□□ 0.5
Atp9aO70228 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.16■□□□□ 0.5
Atp9aO70228 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atp9aO70228 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atp9aO70228 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atp9aO70228 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atp9aO70228 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atp9aO70228 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atp9aO70228 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atp9aO70228 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atp9aO70228 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Atp9aO70228 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Atp9aO70228 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atp9aO70228 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atp9aO70228 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Atp9aO70228 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atp9aO70228 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atp9aO70228 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atp9aO70228 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Atp9aO70228 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atp9aO70228 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms