Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Mmp8O70138 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.09■□□□□ 0.81
Mmp8O70138 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mmp8O70138 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Mmp8O70138 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Mmp8O70138 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Mmp8O70138 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mmp8O70138 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
Mmp8O70138 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Mmp8O70138 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC20.08■□□□□ 0.81
Mmp8O70138 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Mmp8O70138 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
Mmp8O70138 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Mmp8O70138 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Mmp8O70138 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Mmp8O70138 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Mmp8O70138 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
Mmp8O70138 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Mmp8O70138 Gm37166-201ENSMUST00000195473 2474 ntBASIC20.08■□□□□ 0.81
Mmp8O70138 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Mmp8O70138 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Mmp8O70138 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC20.08■□□□□ 0.81
Mmp8O70138 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Mmp8O70138 Gm32996-201ENSMUST00000199828 1447 ntBASIC20.08■□□□□ 0.8
Mmp8O70138 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp8O70138 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp8O70138 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp8O70138 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp8O70138 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp8O70138 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Mmp8O70138 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp8O70138 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC20.07■□□□□ 0.8
Mmp8O70138 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Mmp8O70138 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp8O70138 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp8O70138 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp8O70138 Gm9889-202ENSMUST00000206983 1577 ntBASIC20.07■□□□□ 0.8
Mmp8O70138 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp8O70138 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp8O70138 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp8O70138 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
Mmp8O70138 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp8O70138 Gm28265-201ENSMUST00000188201 2319 ntBASIC20.07■□□□□ 0.8
Mmp8O70138 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp8O70138 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp8O70138 AC115863.1-201ENSMUST00000214815 1813 ntBASIC20.06■□□□□ 0.8
Mmp8O70138 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp8O70138 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp8O70138 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC20.06■□□□□ 0.8
Mmp8O70138 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp8O70138 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp8O70138 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp8O70138 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Mmp8O70138 Olfr129-201ENSMUST00000122318 993 ntBASIC20.06■□□□□ 0.8
Mmp8O70138 Gm27704-201ENSMUST00000185094 107 ntBASIC20.06■□□□□ 0.8
Mmp8O70138 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Mmp8O70138 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp8O70138 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp8O70138 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Mmp8O70138 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Mmp8O70138 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp8O70138 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mmp8O70138 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Mmp8O70138 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mmp8O70138 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Mmp8O70138 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC20.05■□□□□ 0.8
Mmp8O70138 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mmp8O70138 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mmp8O70138 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Mmp8O70138 Ighv6-1-201ENSMUST00000193612 343 ntBASIC20.05■□□□□ 0.8
Mmp8O70138 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.05■□□□□ 0.8
Mmp8O70138 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mmp8O70138 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mmp8O70138 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mmp8O70138 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Mmp8O70138 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mmp8O70138 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Mmp8O70138 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Mmp8O70138 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Mmp8O70138 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mmp8O70138 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mmp8O70138 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mmp8O70138 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Mmp8O70138 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mmp8O70138 Gm20628-201ENSMUST00000177363 3215 ntBASIC20.04■□□□□ 0.8
Mmp8O70138 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mmp8O70138 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Mmp8O70138 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mmp8O70138 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mmp8O70138 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Mmp8O70138 Gm7284-201ENSMUST00000131667 944 ntBASIC20.04■□□□□ 0.8
Mmp8O70138 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mmp8O70138 Gm27742-201ENSMUST00000184667 60 ntBASIC20.04■□□□□ 0.8
Mmp8O70138 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
Mmp8O70138 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mmp8O70138 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Mmp8O70138 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mmp8O70138 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
Mmp8O70138 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.04■□□□□ 0.8
Mmp8O70138 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms