Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Per2O54943 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Per2O54943 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Per2O54943 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Per2O54943 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Per2O54943 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Per2O54943 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Per2O54943 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.16■□□□□ 0.34
Per2O54943 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Per2O54943 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Per2O54943 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Per2O54943 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Per2O54943 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.16■□□□□ 0.34
Per2O54943 Gm18959-201ENSMUST00000208954 655 ntBASIC17.16■□□□□ 0.34
Per2O54943 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.16■□□□□ 0.34
Per2O54943 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Per2O54943 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Per2O54943 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Per2O54943 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Per2O54943 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Per2O54943 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Per2O54943 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Per2O54943 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Per2O54943 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Per2O54943 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Per2O54943 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Per2O54943 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Per2O54943 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.15■□□□□ 0.34
Per2O54943 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.15■□□□□ 0.34
Per2O54943 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.15■□□□□ 0.34
Per2O54943 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
Per2O54943 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.15■□□□□ 0.34
Per2O54943 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.15■□□□□ 0.34
Per2O54943 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Per2O54943 Gm45058-201ENSMUST00000205810 766 ntBASIC17.15■□□□□ 0.34
Per2O54943 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.15■□□□□ 0.34
Per2O54943 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Per2O54943 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Per2O54943 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Per2O54943 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Per2O54943 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Per2O54943 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.15■□□□□ 0.34
Per2O54943 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Per2O54943 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Per2O54943 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Per2O54943 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Per2O54943 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
Per2O54943 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Per2O54943 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Per2O54943 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Per2O54943 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Per2O54943 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Per2O54943 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.14■□□□□ 0.33
Per2O54943 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Per2O54943 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Per2O54943 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.14■□□□□ 0.33
Per2O54943 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Per2O54943 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Per2O54943 Mir1668-201ENSMUST00000184114 107 ntBASIC17.14■□□□□ 0.33
Per2O54943 Gm44450-201ENSMUST00000199528 114 ntBASIC17.14■□□□□ 0.33
Per2O54943 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Per2O54943 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Per2O54943 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
Per2O54943 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Per2O54943 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Per2O54943 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Per2O54943 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Per2O54943 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Per2O54943 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Per2O54943 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Per2O54943 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Per2O54943 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.14■□□□□ 0.33
Per2O54943 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.14■□□□□ 0.33
Per2O54943 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Per2O54943 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Per2O54943 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.13■□□□□ 0.33
Per2O54943 Gm10252-201ENSMUST00000209541 832 ntBASIC17.13■□□□□ 0.33
Per2O54943 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.13■□□□□ 0.33
Per2O54943 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Per2O54943 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Per2O54943 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.13■□□□□ 0.33
Per2O54943 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Per2O54943 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.13■□□□□ 0.33
Per2O54943 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Per2O54943 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.12■□□□□ 0.33
Per2O54943 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Per2O54943 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.12■□□□□ 0.33
Per2O54943 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Per2O54943 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Per2O54943 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Per2O54943 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Per2O54943 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Per2O54943 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Per2O54943 Gm15565-201ENSMUST00000118890 427 ntBASIC17.12■□□□□ 0.33
Per2O54943 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.12■□□□□ 0.33
Per2O54943 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Per2O54943 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.12■□□□□ 0.33
Per2O54943 Mir6982-201ENSMUST00000184354 68 ntBASIC17.12■□□□□ 0.33
Per2O54943 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.12■□□□□ 0.33
Per2O54943 Gm10566-201ENSMUST00000086739 996 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms