Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn5O54942 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn5O54942 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn5O54942 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.06■□□□□ 0.32
Cldn5O54942 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn5O54942 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Cldn5O54942 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn5O54942 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn5O54942 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn5O54942 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cldn5O54942 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn5O54942 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn5O54942 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn5O54942 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.05■□□□□ 0.32
Cldn5O54942 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn5O54942 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn5O54942 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cldn5O54942 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.05■□□□□ 0.32
Cldn5O54942 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.05■□□□□ 0.32
Cldn5O54942 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn5O54942 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn5O54942 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn5O54942 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Cldn5O54942 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn5O54942 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn5O54942 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cldn5O54942 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.05■□□□□ 0.32
Cldn5O54942 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.05■□□□□ 0.32
Cldn5O54942 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Cldn5O54942 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn5O54942 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn5O54942 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.04■□□□□ 0.32
Cldn5O54942 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn5O54942 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn5O54942 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn5O54942 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn5O54942 Gm34391-201ENSMUST00000203706 907 ntBASIC17.04■□□□□ 0.32
Cldn5O54942 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Cldn5O54942 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn5O54942 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn5O54942 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn5O54942 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Cldn5O54942 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn5O54942 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.04■□□□□ 0.32
Cldn5O54942 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn5O54942 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn5O54942 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn5O54942 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Cldn5O54942 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.03■□□□□ 0.32
Cldn5O54942 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn5O54942 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn5O54942 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn5O54942 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn5O54942 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn5O54942 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Cldn5O54942 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn5O54942 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cldn5O54942 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn5O54942 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn5O54942 Gm24589-201ENSMUST00000116692 94 ntBASIC17.03■□□□□ 0.32
Cldn5O54942 Gm13312-201ENSMUST00000119631 718 ntBASIC17.03■□□□□ 0.32
Cldn5O54942 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn5O54942 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Cldn5O54942 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Cldn5O54942 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn5O54942 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.03■□□□□ 0.32
Cldn5O54942 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.03■□□□□ 0.32
Cldn5O54942 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.03■□□□□ 0.32
Cldn5O54942 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn5O54942 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.03■□□□□ 0.32
Cldn5O54942 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn5O54942 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn5O54942 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn5O54942 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn5O54942 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn5O54942 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.03■□□□□ 0.32
Cldn5O54942 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn5O54942 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn5O54942 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.03■□□□□ 0.32
Cldn5O54942 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Cldn5O54942 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn5O54942 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn5O54942 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn5O54942 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Cldn5O54942 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn5O54942 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn5O54942 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Cldn5O54942 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
Cldn5O54942 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn5O54942 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Cldn5O54942 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn5O54942 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cldn5O54942 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cldn5O54942 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cldn5O54942 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Cldn5O54942 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Cldn5O54942 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cldn5O54942 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn5O54942 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn5O54942 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms