Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ChkaO54804 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
ChkaO54804 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ChkaO54804 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
ChkaO54804 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ChkaO54804 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.63■□□□□ 0.25
ChkaO54804 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.63■□□□□ 0.25
ChkaO54804 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.63■□□□□ 0.25
ChkaO54804 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ChkaO54804 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ChkaO54804 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
ChkaO54804 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ChkaO54804 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ChkaO54804 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ChkaO54804 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ChkaO54804 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ChkaO54804 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ChkaO54804 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ChkaO54804 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ChkaO54804 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ChkaO54804 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ChkaO54804 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ChkaO54804 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ChkaO54804 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
ChkaO54804 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ChkaO54804 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ChkaO54804 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ChkaO54804 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ChkaO54804 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ChkaO54804 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ChkaO54804 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ChkaO54804 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ChkaO54804 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ChkaO54804 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
ChkaO54804 Gm11539-201ENSMUST00000119837 557 ntBASIC16.62■□□□□ 0.25
ChkaO54804 Gm37055-201ENSMUST00000191866 133 ntBASIC16.62■□□□□ 0.25
ChkaO54804 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.62■□□□□ 0.25
ChkaO54804 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ChkaO54804 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ChkaO54804 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ChkaO54804 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ChkaO54804 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.62■□□□□ 0.25
ChkaO54804 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ChkaO54804 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ChkaO54804 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ChkaO54804 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ChkaO54804 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ChkaO54804 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.62■□□□□ 0.25
ChkaO54804 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ChkaO54804 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ChkaO54804 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ChkaO54804 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ChkaO54804 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ChkaO54804 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.61■□□□□ 0.25
ChkaO54804 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ChkaO54804 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ChkaO54804 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ChkaO54804 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ChkaO54804 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ChkaO54804 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ChkaO54804 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ChkaO54804 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ChkaO54804 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
ChkaO54804 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.61■□□□□ 0.25
ChkaO54804 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ChkaO54804 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ChkaO54804 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ChkaO54804 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ChkaO54804 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ChkaO54804 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ChkaO54804 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ChkaO54804 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ChkaO54804 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ChkaO54804 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ChkaO54804 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ChkaO54804 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.61■□□□□ 0.25
ChkaO54804 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ChkaO54804 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ChkaO54804 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ChkaO54804 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ChkaO54804 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.61■□□□□ 0.25
ChkaO54804 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ChkaO54804 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ChkaO54804 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ChkaO54804 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ChkaO54804 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ChkaO54804 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ChkaO54804 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ChkaO54804 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.6■□□□□ 0.25
ChkaO54804 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ChkaO54804 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.6■□□□□ 0.25
ChkaO54804 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.6■□□□□ 0.25
ChkaO54804 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ChkaO54804 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
ChkaO54804 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ChkaO54804 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ChkaO54804 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ChkaO54804 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ChkaO54804 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ChkaO54804 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms