Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccr6O54689 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.86□□□□□ -0.19
Ccr6O54689 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccr6O54689 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccr6O54689 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccr6O54689 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.86□□□□□ -0.19
Ccr6O54689 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccr6O54689 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccr6O54689 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccr6O54689 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC13.86□□□□□ -0.19
Ccr6O54689 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccr6O54689 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccr6O54689 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccr6O54689 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Ccr6O54689 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Ccr6O54689 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccr6O54689 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ccr6O54689 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.85□□□□□ -0.19
Ccr6O54689 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccr6O54689 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccr6O54689 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccr6O54689 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccr6O54689 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccr6O54689 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccr6O54689 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccr6O54689 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccr6O54689 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ccr6O54689 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccr6O54689 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ccr6O54689 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccr6O54689 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.85□□□□□ -0.19
Ccr6O54689 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC13.85□□□□□ -0.19
Ccr6O54689 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccr6O54689 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccr6O54689 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccr6O54689 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccr6O54689 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccr6O54689 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ccr6O54689 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccr6O54689 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ccr6O54689 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccr6O54689 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.85□□□□□ -0.19
Ccr6O54689 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccr6O54689 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccr6O54689 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccr6O54689 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.85□□□□□ -0.19
Ccr6O54689 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccr6O54689 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccr6O54689 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccr6O54689 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccr6O54689 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ccr6O54689 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ccr6O54689 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccr6O54689 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccr6O54689 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccr6O54689 App-207ENSMUST00000227737 2827 ntBASIC13.84□□□□□ -0.19
Ccr6O54689 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccr6O54689 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccr6O54689 Gm6211-202ENSMUST00000167849 925 ntBASIC13.84□□□□□ -0.19
Ccr6O54689 Gm17661-201ENSMUST00000170317 270 ntBASIC13.84□□□□□ -0.19
Ccr6O54689 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.84□□□□□ -0.19
Ccr6O54689 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC13.84□□□□□ -0.19
Ccr6O54689 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccr6O54689 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccr6O54689 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Ccr6O54689 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccr6O54689 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccr6O54689 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccr6O54689 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccr6O54689 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccr6O54689 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccr6O54689 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Ccr6O54689 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ccr6O54689 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ccr6O54689 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ccr6O54689 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ccr6O54689 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ccr6O54689 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccr6O54689 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.83□□□□□ -0.2
Ccr6O54689 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccr6O54689 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccr6O54689 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Ccr6O54689 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccr6O54689 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ccr6O54689 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccr6O54689 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccr6O54689 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Ccr6O54689 Gm45560-201ENSMUST00000211492 1472 ntBASIC13.83□□□□□ -0.2
Ccr6O54689 Gm7290-201ENSMUST00000104990 617 ntBASIC13.83□□□□□ -0.2
Ccr6O54689 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccr6O54689 Gm12918-201ENSMUST00000120234 636 ntBASIC13.83□□□□□ -0.2
Ccr6O54689 Gm15710-201ENSMUST00000121821 636 ntBASIC13.83□□□□□ -0.2
Ccr6O54689 Gm5075-201ENSMUST00000196916 622 ntBASIC13.83□□□□□ -0.2
Ccr6O54689 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
Ccr6O54689 Gm4974-201ENSMUST00000209974 875 ntBASIC13.83□□□□□ -0.2
Ccr6O54689 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccr6O54689 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC13.83□□□□□ -0.2
Ccr6O54689 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccr6O54689 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccr6O54689 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms