Protein–RNA interactions for Protein: O35906

Spib, Transcription factor Spi-B, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpibO35906 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
SpibO35906 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.08■□□□□ 0.48
SpibO35906 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SpibO35906 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SpibO35906 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SpibO35906 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SpibO35906 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SpibO35906 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.07■□□□□ 0.48
SpibO35906 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SpibO35906 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.07■□□□□ 0.48
SpibO35906 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.07■□□□□ 0.48
SpibO35906 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.07■□□□□ 0.48
SpibO35906 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SpibO35906 Gm37935-201ENSMUST00000192012 982 ntBASIC18.07■□□□□ 0.48
SpibO35906 Gm9172-201ENSMUST00000212092 954 ntBASIC18.07■□□□□ 0.48
SpibO35906 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.07■□□□□ 0.48
SpibO35906 Gm15590-201ENSMUST00000078419 552 ntBASIC18.07■□□□□ 0.48
SpibO35906 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SpibO35906 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SpibO35906 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SpibO35906 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SpibO35906 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SpibO35906 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.07■□□□□ 0.48
SpibO35906 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SpibO35906 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SpibO35906 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SpibO35906 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SpibO35906 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SpibO35906 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SpibO35906 Mir6404-201ENSMUST00000183699 94 ntBASIC18.06■□□□□ 0.48
SpibO35906 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.06■□□□□ 0.48
SpibO35906 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
SpibO35906 Psmb5-202ENSMUST00000227257 622 ntBASIC18.06■□□□□ 0.48
SpibO35906 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SpibO35906 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SpibO35906 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SpibO35906 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SpibO35906 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SpibO35906 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SpibO35906 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SpibO35906 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
SpibO35906 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SpibO35906 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SpibO35906 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SpibO35906 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SpibO35906 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SpibO35906 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SpibO35906 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SpibO35906 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SpibO35906 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.05■□□□□ 0.48
SpibO35906 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.05■□□□□ 0.48
SpibO35906 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.05■□□□□ 0.48
SpibO35906 Gm6550-201ENSMUST00000187574 993 ntBASIC18.05■□□□□ 0.48
SpibO35906 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.05■□□□□ 0.48
SpibO35906 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.05■□□□□ 0.48
SpibO35906 Gm8655-201ENSMUST00000221159 852 ntBASIC18.05■□□□□ 0.48
SpibO35906 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SpibO35906 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SpibO35906 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SpibO35906 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SpibO35906 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SpibO35906 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SpibO35906 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SpibO35906 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SpibO35906 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SpibO35906 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.05■□□□□ 0.48
SpibO35906 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SpibO35906 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SpibO35906 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SpibO35906 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SpibO35906 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SpibO35906 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SpibO35906 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.04■□□□□ 0.48
SpibO35906 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.04■□□□□ 0.48
SpibO35906 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.04■□□□□ 0.48
SpibO35906 AV026068-213ENSMUST00000223675 1171 ntBASIC18.04■□□□□ 0.48
SpibO35906 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SpibO35906 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SpibO35906 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SpibO35906 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SpibO35906 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SpibO35906 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.04■□□□□ 0.48
SpibO35906 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SpibO35906 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SpibO35906 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SpibO35906 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.03■□□□□ 0.48
SpibO35906 Gm8000-201ENSMUST00000188378 592 ntBASIC18.03■□□□□ 0.48
SpibO35906 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.03■□□□□ 0.48
SpibO35906 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SpibO35906 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SpibO35906 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SpibO35906 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SpibO35906 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SpibO35906 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.03■□□□□ 0.48
SpibO35906 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.02■□□□□ 0.48
SpibO35906 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SpibO35906 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
SpibO35906 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SpibO35906 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SpibO35906 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms