Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Gm13059-201ENSMUST00000119881 398 ntBASIC17.64■□□□□ 0.41
Clcn6O35454 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC17.64■□□□□ 0.41
Clcn6O35454 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.64■□□□□ 0.41
Clcn6O35454 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn6O35454 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn6O35454 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn6O35454 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn6O35454 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Clcn6O35454 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn6O35454 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Clcn6O35454 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn6O35454 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn6O35454 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.64■□□□□ 0.41
Clcn6O35454 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Clcn6O35454 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Clcn6O35454 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn6O35454 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn6O35454 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Clcn6O35454 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn6O35454 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn6O35454 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn6O35454 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.63■□□□□ 0.41
Clcn6O35454 Prdm6-202ENSMUST00000115398 1474 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn6O35454 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn6O35454 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn6O35454 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn6O35454 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn6O35454 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn6O35454 2310040G07Rik-202ENSMUST00000145897 462 ntTSL 3 BASIC17.63■□□□□ 0.41
Clcn6O35454 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC17.63■□□□□ 0.41
Clcn6O35454 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC17.63■□□□□ 0.41
Clcn6O35454 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC17.63■□□□□ 0.41
Clcn6O35454 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn6O35454 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn6O35454 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn6O35454 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn6O35454 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn6O35454 Gm28979-201ENSMUST00000190949 1540 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn6O35454 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.62■□□□□ 0.41
Clcn6O35454 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn6O35454 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Clcn6O35454 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn6O35454 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn6O35454 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn6O35454 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn6O35454 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Clcn6O35454 Gm649-201ENSMUST00000117284 1054 ntBASIC17.62■□□□□ 0.41
Clcn6O35454 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC17.62■□□□□ 0.41
Clcn6O35454 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC17.62■□□□□ 0.41
Clcn6O35454 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.62■□□□□ 0.41
Clcn6O35454 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn6O35454 Gm28941-201ENSMUST00000185536 1017 ntBASIC17.62■□□□□ 0.41
Clcn6O35454 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC17.62■□□□□ 0.41
Clcn6O35454 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC17.62■□□□□ 0.41
Clcn6O35454 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC17.62■□□□□ 0.41
Clcn6O35454 Gm10138-203ENSMUST00000206952 366 ntBASIC17.62■□□□□ 0.41
Clcn6O35454 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn6O35454 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn6O35454 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn6O35454 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn6O35454 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
Clcn6O35454 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn6O35454 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn6O35454 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.62■□□□□ 0.41
Clcn6O35454 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn6O35454 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.61■□□□□ 0.41
Clcn6O35454 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn6O35454 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn6O35454 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.61■□□□□ 0.41
Clcn6O35454 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn6O35454 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.61■□□□□ 0.41
Clcn6O35454 Ighv10-4-201ENSMUST00000193702 299 ntBASIC17.61■□□□□ 0.41
Clcn6O35454 Gm18660-201ENSMUST00000199542 629 ntBASIC17.61■□□□□ 0.41
Clcn6O35454 Gm29791-202ENSMUST00000207888 369 ntBASIC17.61■□□□□ 0.41
Clcn6O35454 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
Clcn6O35454 AC124569.4-201ENSMUST00000223830 1220 ntBASIC17.61■□□□□ 0.41
Clcn6O35454 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn6O35454 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Clcn6O35454 Gm10812-201ENSMUST00000099864 546 ntBASIC17.61■□□□□ 0.41
Clcn6O35454 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn6O35454 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Clcn6O35454 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn6O35454 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn6O35454 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn6O35454 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn6O35454 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn6O35454 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Clcn6O35454 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn6O35454 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Clcn6O35454 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn6O35454 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Clcn6O35454 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn6O35454 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn6O35454 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn6O35454 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Clcn6O35454 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Clcn6O35454 Gm15375-201ENSMUST00000119510 849 ntBASIC17.6■□□□□ 0.41
Clcn6O35454 Gm13158-201ENSMUST00000122007 736 ntBASIC17.6■□□□□ 0.41
Clcn6O35454 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn6O35454 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms