Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.6■□□□□ 0.73
Hdac1O09106 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac1O09106 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac1O09106 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac1O09106 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac1O09106 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.6■□□□□ 0.73
Hdac1O09106 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Hdac1O09106 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac1O09106 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac1O09106 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac1O09106 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.59■□□□□ 0.73
Hdac1O09106 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Hdac1O09106 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hdac1O09106 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hdac1O09106 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.59■□□□□ 0.73
Hdac1O09106 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hdac1O09106 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.59■□□□□ 0.73
Hdac1O09106 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hdac1O09106 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.59■□□□□ 0.73
Hdac1O09106 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Hdac1O09106 Gm44450-201ENSMUST00000199528 114 ntBASIC19.59■□□□□ 0.73
Hdac1O09106 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hdac1O09106 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hdac1O09106 Gm18115-201ENSMUST00000221209 621 ntBASIC19.59■□□□□ 0.73
Hdac1O09106 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hdac1O09106 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Hdac1O09106 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.59■□□□□ 0.73
Hdac1O09106 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hdac1O09106 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hdac1O09106 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hdac1O09106 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hdac1O09106 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hdac1O09106 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Hdac1O09106 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hdac1O09106 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Hdac1O09106 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
Hdac1O09106 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hdac1O09106 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
Hdac1O09106 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hdac1O09106 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hdac1O09106 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hdac1O09106 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hdac1O09106 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hdac1O09106 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hdac1O09106 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hdac1O09106 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hdac1O09106 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hdac1O09106 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hdac1O09106 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.58■□□□□ 0.72
Hdac1O09106 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hdac1O09106 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hdac1O09106 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hdac1O09106 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hdac1O09106 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Hdac1O09106 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hdac1O09106 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hdac1O09106 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hdac1O09106 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.57■□□□□ 0.72
Hdac1O09106 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hdac1O09106 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Hdac1O09106 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hdac1O09106 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC19.57■□□□□ 0.72
Hdac1O09106 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hdac1O09106 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hdac1O09106 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hdac1O09106 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hdac1O09106 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.57■□□□□ 0.72
Hdac1O09106 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hdac1O09106 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.57■□□□□ 0.72
Hdac1O09106 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hdac1O09106 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hdac1O09106 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.57■□□□□ 0.72
Hdac1O09106 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hdac1O09106 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hdac1O09106 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hdac1O09106 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.57■□□□□ 0.72
Hdac1O09106 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hdac1O09106 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hdac1O09106 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hdac1O09106 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hdac1O09106 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hdac1O09106 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hdac1O09106 Gm10653-202ENSMUST00000139570 835 ntBASIC19.56■□□□□ 0.72
Hdac1O09106 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hdac1O09106 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Hdac1O09106 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.56■□□□□ 0.72
Hdac1O09106 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.56■□□□□ 0.72
Hdac1O09106 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hdac1O09106 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Hdac1O09106 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Hdac1O09106 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hdac1O09106 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hdac1O09106 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hdac1O09106 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC19.56■□□□□ 0.72
Hdac1O09106 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hdac1O09106 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hdac1O09106 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hdac1O09106 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hdac1O09106 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hdac1O09106 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms