Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh2b3O09039 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh2b3O09039 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Sh2b3O09039 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sh2b3O09039 Gm37722-201ENSMUST00000193757 208 ntBASIC14.64□□□□□ -0.07
Sh2b3O09039 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.64□□□□□ -0.07
Sh2b3O09039 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Sh2b3O09039 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Sh2b3O09039 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh2b3O09039 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh2b3O09039 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sh2b3O09039 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Sh2b3O09039 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh2b3O09039 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.64□□□□□ -0.07
Sh2b3O09039 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh2b3O09039 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh2b3O09039 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.64□□□□□ -0.07
Sh2b3O09039 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh2b3O09039 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.63□□□□□ -0.07
Sh2b3O09039 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sh2b3O09039 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh2b3O09039 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.63□□□□□ -0.07
Sh2b3O09039 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Sh2b3O09039 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Sh2b3O09039 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh2b3O09039 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sh2b3O09039 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh2b3O09039 Mir770-201ENSMUST00000103252 94 ntBASIC14.63□□□□□ -0.07
Sh2b3O09039 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh2b3O09039 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh2b3O09039 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Sh2b3O09039 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.63□□□□□ -0.07
Sh2b3O09039 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.63□□□□□ -0.07
Sh2b3O09039 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.63□□□□□ -0.07
Sh2b3O09039 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sh2b3O09039 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh2b3O09039 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh2b3O09039 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh2b3O09039 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Sh2b3O09039 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh2b3O09039 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sh2b3O09039 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh2b3O09039 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.63□□□□□ -0.07
Sh2b3O09039 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh2b3O09039 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.62□□□□□ -0.07
Sh2b3O09039 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh2b3O09039 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh2b3O09039 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh2b3O09039 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh2b3O09039 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh2b3O09039 Mir3081-201ENSMUST00000175305 84 ntBASIC14.62□□□□□ -0.07
Sh2b3O09039 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Sh2b3O09039 Gm27000-201ENSMUST00000182943 842 ntBASIC14.62□□□□□ -0.07
Sh2b3O09039 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Sh2b3O09039 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh2b3O09039 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh2b3O09039 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh2b3O09039 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh2b3O09039 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh2b3O09039 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh2b3O09039 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Sh2b3O09039 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh2b3O09039 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh2b3O09039 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Sh2b3O09039 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sh2b3O09039 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh2b3O09039 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh2b3O09039 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh2b3O09039 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh2b3O09039 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Sh2b3O09039 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh2b3O09039 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh2b3O09039 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh2b3O09039 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh2b3O09039 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh2b3O09039 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh2b3O09039 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh2b3O09039 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh2b3O09039 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh2b3O09039 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh2b3O09039 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Sh2b3O09039 Gm13216-201ENSMUST00000117145 591 ntBASIC14.61□□□□□ -0.07
Sh2b3O09039 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh2b3O09039 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sh2b3O09039 Gm45328-201ENSMUST00000210942 917 ntBASIC14.61□□□□□ -0.07
Sh2b3O09039 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Sh2b3O09039 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sh2b3O09039 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Sh2b3O09039 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.61□□□□□ -0.07
Sh2b3O09039 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.61□□□□□ -0.07
Sh2b3O09039 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh2b3O09039 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh2b3O09039 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.61□□□□□ -0.07
Sh2b3O09039 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh2b3O09039 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh2b3O09039 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh2b3O09039 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh2b3O09039 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh2b3O09039 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sh2b3O09039 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms