Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1O08852 Gm12428-201ENSMUST00000119844 727 ntBASIC10.36□□□□□ -0.75
Pkd1O08852 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC10.36□□□□□ -0.75
Pkd1O08852 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC10.36□□□□□ -0.75
Pkd1O08852 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1O08852 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC10.36□□□□□ -0.75
Pkd1O08852 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1O08852 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC10.36□□□□□ -0.75
Pkd1O08852 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1O08852 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1O08852 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1O08852 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Pkd1O08852 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1O08852 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1O08852 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1O08852 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Pkd1O08852 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1O08852 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1O08852 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC10.36□□□□□ -0.75
Pkd1O08852 AC117588.1-201ENSMUST00000228510 999 ntBASIC10.36□□□□□ -0.75
Pkd1O08852 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Pkd1O08852 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1O08852 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pkd1O08852 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pkd1O08852 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pkd1O08852 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pkd1O08852 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Pkd1O08852 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Pkd1O08852 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Pkd1O08852 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Pkd1O08852 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pkd1O08852 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pkd1O08852 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pkd1O08852 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC10.35□□□□□ -0.75
Pkd1O08852 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC10.35□□□□□ -0.75
Pkd1O08852 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC10.35□□□□□ -0.75
Pkd1O08852 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Pkd1O08852 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pkd1O08852 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pkd1O08852 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pkd1O08852 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pkd1O08852 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pkd1O08852 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pkd1O08852 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC10.35□□□□□ -0.75
Pkd1O08852 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pkd1O08852 H2-Pa-201ENSMUST00000182803 626 ntBASIC10.35□□□□□ -0.75
Pkd1O08852 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC10.35□□□□□ -0.75
Pkd1O08852 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Pkd1O08852 AC155252.2-201ENSMUST00000226946 680 ntBASIC10.35□□□□□ -0.75
Pkd1O08852 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pkd1O08852 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pkd1O08852 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pkd1O08852 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Pkd1O08852 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pkd1O08852 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC10.34□□□□□ -0.75
Pkd1O08852 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC10.34□□□□□ -0.75
Pkd1O08852 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pkd1O08852 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pkd1O08852 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pkd1O08852 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pkd1O08852 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pkd1O08852 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Pkd1O08852 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pkd1O08852 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pkd1O08852 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pkd1O08852 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC10.34□□□□□ -0.75
Pkd1O08852 Gm37153-201ENSMUST00000193637 231 ntBASIC10.34□□□□□ -0.75
Pkd1O08852 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Pkd1O08852 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC10.34□□□□□ -0.75
Pkd1O08852 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pkd1O08852 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Pkd1O08852 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pkd1O08852 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pkd1O08852 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pkd1O08852 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
Pkd1O08852 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pkd1O08852 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pkd1O08852 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pkd1O08852 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pkd1O08852 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pkd1O08852 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pkd1O08852 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pkd1O08852 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Pkd1O08852 Gm5177-201ENSMUST00000183092 997 ntBASIC10.33□□□□□ -0.76
Pkd1O08852 Mir6404-201ENSMUST00000183699 94 ntBASIC10.33□□□□□ -0.76
Pkd1O08852 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC10.33□□□□□ -0.76
Pkd1O08852 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pkd1O08852 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pkd1O08852 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pkd1O08852 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pkd1O08852 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Pkd1O08852 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pkd1O08852 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Pkd1O08852 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Pkd1O08852 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pkd1O08852 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pkd1O08852 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC10.33□□□□□ -0.76
Pkd1O08852 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pkd1O08852 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Pkd1O08852 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms