Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ebf3O08791 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ebf3O08791 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ebf3O08791 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ebf3O08791 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.05■□□□□ 0.32
Ebf3O08791 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ebf3O08791 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ebf3O08791 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Ebf3O08791 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ebf3O08791 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ebf3O08791 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.05■□□□□ 0.32
Ebf3O08791 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ebf3O08791 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ebf3O08791 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Ebf3O08791 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ebf3O08791 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.05■□□□□ 0.32
Ebf3O08791 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ebf3O08791 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ebf3O08791 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ebf3O08791 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.04■□□□□ 0.32
Ebf3O08791 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ebf3O08791 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ebf3O08791 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ebf3O08791 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ebf3O08791 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ebf3O08791 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ebf3O08791 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ebf3O08791 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.04■□□□□ 0.32
Ebf3O08791 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ebf3O08791 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ebf3O08791 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ebf3O08791 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.04■□□□□ 0.32
Ebf3O08791 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ebf3O08791 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.04■□□□□ 0.32
Ebf3O08791 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ebf3O08791 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ebf3O08791 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ebf3O08791 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ebf3O08791 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ebf3O08791 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.04■□□□□ 0.32
Ebf3O08791 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ebf3O08791 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ebf3O08791 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ebf3O08791 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ebf3O08791 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ebf3O08791 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ebf3O08791 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ebf3O08791 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.03■□□□□ 0.32
Ebf3O08791 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ebf3O08791 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ebf3O08791 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ebf3O08791 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ebf3O08791 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ebf3O08791 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ebf3O08791 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ebf3O08791 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ebf3O08791 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Ebf3O08791 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ebf3O08791 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ebf3O08791 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ebf3O08791 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ebf3O08791 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ebf3O08791 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ebf3O08791 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ebf3O08791 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ebf3O08791 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.02■□□□□ 0.32
Ebf3O08791 Gm11452-201ENSMUST00000122376 690 ntBASIC17.02■□□□□ 0.32
Ebf3O08791 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Ebf3O08791 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Ebf3O08791 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ebf3O08791 Gm44450-201ENSMUST00000199528 114 ntBASIC17.02■□□□□ 0.32
Ebf3O08791 Gm6443-201ENSMUST00000203599 874 ntBASIC17.02■□□□□ 0.32
Ebf3O08791 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ebf3O08791 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ebf3O08791 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ebf3O08791 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ebf3O08791 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ebf3O08791 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ebf3O08791 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Ebf3O08791 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ebf3O08791 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ebf3O08791 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Ebf3O08791 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ebf3O08791 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ebf3O08791 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Ebf3O08791 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ebf3O08791 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ebf3O08791 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ebf3O08791 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.01■□□□□ 0.31
Ebf3O08791 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ebf3O08791 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ebf3O08791 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ebf3O08791 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ebf3O08791 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Ebf3O08791 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ebf3O08791 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.01■□□□□ 0.31
Ebf3O08791 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ebf3O08791 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.01■□□□□ 0.31
Ebf3O08791 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ebf3O08791 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms