Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Dctn1O08788 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Dctn1O08788 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Dctn1O08788 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Dctn1O08788 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC20.25■□□□□ 0.83
Dctn1O08788 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
Dctn1O08788 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Dctn1O08788 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Dctn1O08788 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Dctn1O08788 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Dctn1O08788 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Dctn1O08788 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Dctn1O08788 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Dctn1O08788 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Dctn1O08788 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Dctn1O08788 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Dctn1O08788 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.24■□□□□ 0.83
Dctn1O08788 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Dctn1O08788 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC20.24■□□□□ 0.83
Dctn1O08788 Gm25990-201ENSMUST00000102440 86 ntBASIC20.24■□□□□ 0.83
Dctn1O08788 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC20.24■□□□□ 0.83
Dctn1O08788 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Dctn1O08788 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Dctn1O08788 Gm7507-201ENSMUST00000183053 1008 ntBASIC20.24■□□□□ 0.83
Dctn1O08788 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC20.24■□□□□ 0.83
Dctn1O08788 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Dctn1O08788 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Dctn1O08788 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Dctn1O08788 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Dctn1O08788 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Dctn1O08788 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Dctn1O08788 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC20.23■□□□□ 0.83
Dctn1O08788 AC154527.4-201ENSMUST00000224364 1667 ntBASIC20.23■□□□□ 0.83
Dctn1O08788 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Dctn1O08788 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Dctn1O08788 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Dctn1O08788 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Dctn1O08788 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Dctn1O08788 Gm8000-201ENSMUST00000188378 592 ntBASIC20.23■□□□□ 0.83
Dctn1O08788 Gm43073-201ENSMUST00000198200 1189 ntBASIC20.23■□□□□ 0.83
Dctn1O08788 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC20.23■□□□□ 0.83
Dctn1O08788 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Dctn1O08788 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.23■□□□□ 0.83
Dctn1O08788 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Dctn1O08788 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Dctn1O08788 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.23■□□□□ 0.83
Dctn1O08788 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Dctn1O08788 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Dctn1O08788 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Dctn1O08788 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dctn1O08788 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dctn1O08788 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dctn1O08788 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Dctn1O08788 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dctn1O08788 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dctn1O08788 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dctn1O08788 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Dctn1O08788 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dctn1O08788 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC20.22■□□□□ 0.83
Dctn1O08788 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dctn1O08788 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dctn1O08788 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dctn1O08788 Gm4535-201ENSMUST00000182274 558 ntBASIC20.22■□□□□ 0.83
Dctn1O08788 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC20.22■□□□□ 0.83
Dctn1O08788 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC20.22■□□□□ 0.83
Dctn1O08788 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dctn1O08788 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dctn1O08788 Gm10355-201ENSMUST00000097146 517 ntBASIC20.22■□□□□ 0.83
Dctn1O08788 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dctn1O08788 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20.22■□□□□ 0.83
Dctn1O08788 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dctn1O08788 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Dctn1O08788 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Dctn1O08788 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dctn1O08788 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dctn1O08788 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dctn1O08788 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dctn1O08788 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dctn1O08788 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Dctn1O08788 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Dctn1O08788 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Dctn1O08788 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Dctn1O08788 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Dctn1O08788 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Dctn1O08788 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Dctn1O08788 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Dctn1O08788 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Dctn1O08788 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Dctn1O08788 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC20.21■□□□□ 0.83
Dctn1O08788 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC20.21■□□□□ 0.83
Dctn1O08788 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC20.21■□□□□ 0.83
Dctn1O08788 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Dctn1O08788 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Dctn1O08788 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Dctn1O08788 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Dctn1O08788 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.83
Dctn1O08788 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Dctn1O08788 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Dctn1O08788 Gm11779-201ENSMUST00000118541 368 ntBASIC20.2■□□□□ 0.82
Dctn1O08788 Gm15173-201ENSMUST00000122049 433 ntBASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms