Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ube3aO08759 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ube3aO08759 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ube3aO08759 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ube3aO08759 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ube3aO08759 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ube3aO08759 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.83■□□□□ 0.44
Ube3aO08759 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ube3aO08759 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube3aO08759 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ube3aO08759 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Ube3aO08759 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ube3aO08759 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ube3aO08759 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube3aO08759 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.82■□□□□ 0.44
Ube3aO08759 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Ube3aO08759 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.82■□□□□ 0.44
Ube3aO08759 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube3aO08759 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube3aO08759 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube3aO08759 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube3aO08759 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ube3aO08759 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Ube3aO08759 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube3aO08759 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube3aO08759 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube3aO08759 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube3aO08759 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.81■□□□□ 0.44
Ube3aO08759 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3aO08759 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3aO08759 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3aO08759 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3aO08759 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3aO08759 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.81■□□□□ 0.44
Ube3aO08759 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3aO08759 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Ube3aO08759 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3aO08759 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.81■□□□□ 0.44
Ube3aO08759 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.81■□□□□ 0.44
Ube3aO08759 Gm43183-201ENSMUST00000200632 547 ntBASIC17.81■□□□□ 0.44
Ube3aO08759 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3aO08759 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Ube3aO08759 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3aO08759 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3aO08759 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3aO08759 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3aO08759 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3aO08759 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.81■□□□□ 0.44
Ube3aO08759 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3aO08759 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Ube3aO08759 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.81■□□□□ 0.44
Ube3aO08759 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3aO08759 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube3aO08759 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ube3aO08759 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.8■□□□□ 0.44
Ube3aO08759 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ube3aO08759 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube3aO08759 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube3aO08759 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube3aO08759 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube3aO08759 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.8■□□□□ 0.44
Ube3aO08759 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ube3aO08759 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube3aO08759 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ube3aO08759 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube3aO08759 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ube3aO08759 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.8■□□□□ 0.44
Ube3aO08759 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ube3aO08759 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube3aO08759 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ube3aO08759 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube3aO08759 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3aO08759 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.79■□□□□ 0.44
Ube3aO08759 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3aO08759 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3aO08759 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3aO08759 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3aO08759 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3aO08759 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3aO08759 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3aO08759 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3aO08759 Gm5643-201ENSMUST00000117081 966 ntBASIC17.79■□□□□ 0.44
Ube3aO08759 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.79■□□□□ 0.44
Ube3aO08759 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3aO08759 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3aO08759 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.79■□□□□ 0.44
Ube3aO08759 Gm10252-201ENSMUST00000209541 832 ntBASIC17.79■□□□□ 0.44
Ube3aO08759 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3aO08759 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
Ube3aO08759 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.79■□□□□ 0.44
Ube3aO08759 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3aO08759 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3aO08759 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3aO08759 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3aO08759 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3aO08759 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3aO08759 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Ube3aO08759 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ube3aO08759 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ube3aO08759 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms