Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.73■□□□□ 0.27
Tnfrsf11bO08712 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf11bO08712 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf11bO08712 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Tnfrsf11bO08712 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf11bO08712 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
Tnfrsf11bO08712 Gm30025-201ENSMUST00000218555 728 ntBASIC16.73■□□□□ 0.27
Tnfrsf11bO08712 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf11bO08712 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf11bO08712 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf11bO08712 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf11bO08712 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf11bO08712 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf11bO08712 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf11bO08712 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf11bO08712 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf11bO08712 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf11bO08712 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf11bO08712 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf11bO08712 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf11bO08712 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf11bO08712 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Tnfrsf11bO08712 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf11bO08712 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf11bO08712 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf11bO08712 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf11bO08712 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Tnfrsf11bO08712 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf11bO08712 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf11bO08712 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf11bO08712 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Tnfrsf11bO08712 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.72■□□□□ 0.27
Tnfrsf11bO08712 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf11bO08712 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf11bO08712 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf11bO08712 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf11bO08712 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf11bO08712 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf11bO08712 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf11bO08712 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf11bO08712 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Tnfrsf11bO08712 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.72■□□□□ 0.27
Tnfrsf11bO08712 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf11bO08712 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf11bO08712 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf11bO08712 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf11bO08712 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf11bO08712 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf11bO08712 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Tnfrsf11bO08712 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf11bO08712 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf11bO08712 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf11bO08712 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Tnfrsf11bO08712 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf11bO08712 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf11bO08712 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf11bO08712 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Tnfrsf11bO08712 Gm2274-201ENSMUST00000184539 609 ntBASIC16.71■□□□□ 0.27
Tnfrsf11bO08712 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf11bO08712 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Tnfrsf11bO08712 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Tnfrsf11bO08712 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.71■□□□□ 0.27
Tnfrsf11bO08712 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf11bO08712 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf11bO08712 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf11bO08712 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Tnfrsf11bO08712 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.7■□□□□ 0.26
Tnfrsf11bO08712 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf11bO08712 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf11bO08712 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.7■□□□□ 0.26
Tnfrsf11bO08712 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.7■□□□□ 0.26
Tnfrsf11bO08712 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf11bO08712 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf11bO08712 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf11bO08712 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.7■□□□□ 0.26
Tnfrsf11bO08712 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf11bO08712 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.7■□□□□ 0.26
Tnfrsf11bO08712 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf11bO08712 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.7■□□□□ 0.26
Tnfrsf11bO08712 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.7■□□□□ 0.26
Tnfrsf11bO08712 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.7■□□□□ 0.26
Tnfrsf11bO08712 Gm44450-201ENSMUST00000199528 114 ntBASIC16.7■□□□□ 0.26
Tnfrsf11bO08712 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Tnfrsf11bO08712 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf11bO08712 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf11bO08712 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.7■□□□□ 0.26
Tnfrsf11bO08712 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.7■□□□□ 0.26
Tnfrsf11bO08712 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf11bO08712 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf11bO08712 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf11bO08712 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf11bO08712 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Tnfrsf11bO08712 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf11bO08712 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf11bO08712 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf11bO08712 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnfrsf11bO08712 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnfrsf11bO08712 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnfrsf11bO08712 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnfrsf11bO08712 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms