Protein–RNA interactions for Protein: J3QMS8

Gm3415, Predicted gene 3415, mousemouse

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3415J3QMS8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3415J3QMS8 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3415J3QMS8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3415J3QMS8 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3415J3QMS8 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3415J3QMS8 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3415J3QMS8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3415J3QMS8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3415J3QMS8 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3415J3QMS8 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Gm3415J3QMS8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3415J3QMS8 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3415J3QMS8 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3415J3QMS8 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Gm3415J3QMS8 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3415J3QMS8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3415J3QMS8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3415J3QMS8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3415J3QMS8 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3415J3QMS8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3415J3QMS8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3415J3QMS8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Gm3415J3QMS8 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.56■□□□□ 0.4
Gm3415J3QMS8 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3415J3QMS8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3415J3QMS8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3415J3QMS8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3415J3QMS8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.56■□□□□ 0.4
Gm3415J3QMS8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Gm3415J3QMS8 Gm37722-201ENSMUST00000193757 208 ntBASIC17.56■□□□□ 0.4
Gm3415J3QMS8 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.56■□□□□ 0.4
Gm3415J3QMS8 Gm18115-201ENSMUST00000221209 621 ntBASIC17.56■□□□□ 0.4
Gm3415J3QMS8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3415J3QMS8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3415J3QMS8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3415J3QMS8 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3415J3QMS8 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.56■□□□□ 0.4
Gm3415J3QMS8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3415J3QMS8 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3415J3QMS8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3415J3QMS8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Gm3415J3QMS8 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3415J3QMS8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3415J3QMS8 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3415J3QMS8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3415J3QMS8 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3415J3QMS8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3415J3QMS8 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3415J3QMS8 AA414768-201ENSMUST00000121924 1257 ntBASIC17.55■□□□□ 0.4
Gm3415J3QMS8 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.55■□□□□ 0.4
Gm3415J3QMS8 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3415J3QMS8 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3415J3QMS8 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3415J3QMS8 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3415J3QMS8 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3415J3QMS8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3415J3QMS8 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.55■□□□□ 0.4
Gm3415J3QMS8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3415J3QMS8 Haglr-201ENSMUST00000100000 2085 ntBASIC17.55■□□□□ 0.4
Gm3415J3QMS8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.55■□□□□ 0.4
Gm3415J3QMS8 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3415J3QMS8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Gm3415J3QMS8 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3415J3QMS8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3415J3QMS8 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3415J3QMS8 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3415J3QMS8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Gm3415J3QMS8 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.54■□□□□ 0.4
Gm3415J3QMS8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3415J3QMS8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3415J3QMS8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3415J3QMS8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3415J3QMS8 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3415J3QMS8 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3415J3QMS8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Gm3415J3QMS8 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3415J3QMS8 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Gm3415J3QMS8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.54■□□□□ 0.4
Gm3415J3QMS8 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3415J3QMS8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3415J3QMS8 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3415J3QMS8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3415J3QMS8 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3415J3QMS8 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3415J3QMS8 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3415J3QMS8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3415J3QMS8 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3415J3QMS8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3415J3QMS8 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.54■□□□□ 0.4
Gm3415J3QMS8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3415J3QMS8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3415J3QMS8 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3415J3QMS8 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3415J3QMS8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3415J3QMS8 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Gm3415J3QMS8 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3415J3QMS8 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3415J3QMS8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3415J3QMS8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3415J3QMS8 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms