Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3tc1G3X9F6 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3tc1G3X9F6 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Sh3tc1G3X9F6 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC19.88■□□□□ 0.77
Sh3tc1G3X9F6 Gm11780-201ENSMUST00000136880 516 ntBASIC19.88■□□□□ 0.77
Sh3tc1G3X9F6 Gm25406-201ENSMUST00000157599 105 ntBASIC19.88■□□□□ 0.77
Sh3tc1G3X9F6 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Sh3tc1G3X9F6 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3tc1G3X9F6 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3tc1G3X9F6 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Sh3tc1G3X9F6 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3tc1G3X9F6 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3tc1G3X9F6 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3tc1G3X9F6 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3tc1G3X9F6 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3tc1G3X9F6 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.88■□□□□ 0.77
Sh3tc1G3X9F6 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3tc1G3X9F6 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3tc1G3X9F6 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3tc1G3X9F6 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3tc1G3X9F6 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3tc1G3X9F6 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3tc1G3X9F6 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3tc1G3X9F6 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3tc1G3X9F6 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Sh3tc1G3X9F6 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3tc1G3X9F6 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3tc1G3X9F6 Gm37500-201ENSMUST00000192059 1443 ntBASIC19.87■□□□□ 0.77
Sh3tc1G3X9F6 Gm5837-201ENSMUST00000191844 1369 ntBASIC19.87■□□□□ 0.77
Sh3tc1G3X9F6 Gm12260-201ENSMUST00000122447 411 ntBASIC19.87■□□□□ 0.77
Sh3tc1G3X9F6 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3tc1G3X9F6 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3tc1G3X9F6 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3tc1G3X9F6 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3tc1G3X9F6 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3tc1G3X9F6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Sh3tc1G3X9F6 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3tc1G3X9F6 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3tc1G3X9F6 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3tc1G3X9F6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sh3tc1G3X9F6 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sh3tc1G3X9F6 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Sh3tc1G3X9F6 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sh3tc1G3X9F6 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC19.86■□□□□ 0.77
Sh3tc1G3X9F6 Gm14140-201ENSMUST00000119999 995 ntBASIC19.86■□□□□ 0.77
Sh3tc1G3X9F6 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC19.86■□□□□ 0.77
Sh3tc1G3X9F6 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sh3tc1G3X9F6 Gm43935-201ENSMUST00000203569 1050 ntBASIC19.86■□□□□ 0.77
Sh3tc1G3X9F6 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC19.86■□□□□ 0.77
Sh3tc1G3X9F6 Gm8655-201ENSMUST00000221159 852 ntBASIC19.86■□□□□ 0.77
Sh3tc1G3X9F6 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC19.86■□□□□ 0.77
Sh3tc1G3X9F6 AC154222.1-201ENSMUST00000223882 475 ntBASIC19.86■□□□□ 0.77
Sh3tc1G3X9F6 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sh3tc1G3X9F6 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sh3tc1G3X9F6 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sh3tc1G3X9F6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
Sh3tc1G3X9F6 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sh3tc1G3X9F6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sh3tc1G3X9F6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.86■□□□□ 0.77
Sh3tc1G3X9F6 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sh3tc1G3X9F6 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sh3tc1G3X9F6 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Sh3tc1G3X9F6 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sh3tc1G3X9F6 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sh3tc1G3X9F6 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC19.86■□□□□ 0.77
Sh3tc1G3X9F6 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sh3tc1G3X9F6 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sh3tc1G3X9F6 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sh3tc1G3X9F6 Gm27702-201ENSMUST00000184512 56 ntBASIC19.85■□□□□ 0.77
Sh3tc1G3X9F6 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sh3tc1G3X9F6 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sh3tc1G3X9F6 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sh3tc1G3X9F6 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sh3tc1G3X9F6 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Sh3tc1G3X9F6 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sh3tc1G3X9F6 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sh3tc1G3X9F6 Gm7222-201ENSMUST00000117512 906 ntBASIC19.84■□□□□ 0.77
Sh3tc1G3X9F6 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sh3tc1G3X9F6 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sh3tc1G3X9F6 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sh3tc1G3X9F6 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sh3tc1G3X9F6 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Sh3tc1G3X9F6 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Sh3tc1G3X9F6 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sh3tc1G3X9F6 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Sh3tc1G3X9F6 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sh3tc1G3X9F6 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sh3tc1G3X9F6 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sh3tc1G3X9F6 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sh3tc1G3X9F6 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Sh3tc1G3X9F6 Gm6184-201ENSMUST00000120403 1261 ntBASIC19.83■□□□□ 0.77
Sh3tc1G3X9F6 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sh3tc1G3X9F6 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Sh3tc1G3X9F6 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Sh3tc1G3X9F6 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC19.83■□□□□ 0.77
Sh3tc1G3X9F6 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Sh3tc1G3X9F6 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.83■□□□□ 0.77
Sh3tc1G3X9F6 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Sh3tc1G3X9F6 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sh3tc1G3X9F6 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms