Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chrna9G3X8Z7 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.7■□□□□ 0.42
Chrna9G3X8Z7 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.7■□□□□ 0.42
Chrna9G3X8Z7 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.7■□□□□ 0.42
Chrna9G3X8Z7 Gm45058-201ENSMUST00000205810 766 ntBASIC17.7■□□□□ 0.42
Chrna9G3X8Z7 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chrna9G3X8Z7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Chrna9G3X8Z7 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chrna9G3X8Z7 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chrna9G3X8Z7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chrna9G3X8Z7 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chrna9G3X8Z7 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chrna9G3X8Z7 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.69■□□□□ 0.42
Chrna9G3X8Z7 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Chrna9G3X8Z7 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.69■□□□□ 0.42
Chrna9G3X8Z7 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Chrna9G3X8Z7 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Chrna9G3X8Z7 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chrna9G3X8Z7 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chrna9G3X8Z7 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Chrna9G3X8Z7 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chrna9G3X8Z7 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chrna9G3X8Z7 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.69■□□□□ 0.42
Chrna9G3X8Z7 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chrna9G3X8Z7 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chrna9G3X8Z7 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chrna9G3X8Z7 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chrna9G3X8Z7 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chrna9G3X8Z7 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chrna9G3X8Z7 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chrna9G3X8Z7 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.68■□□□□ 0.42
Chrna9G3X8Z7 Mir5130-201ENSMUST00000175160 84 ntBASIC17.68■□□□□ 0.42
Chrna9G3X8Z7 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chrna9G3X8Z7 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chrna9G3X8Z7 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chrna9G3X8Z7 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chrna9G3X8Z7 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Chrna9G3X8Z7 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chrna9G3X8Z7 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chrna9G3X8Z7 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chrna9G3X8Z7 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chrna9G3X8Z7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Chrna9G3X8Z7 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Chrna9G3X8Z7 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.68■□□□□ 0.42
Chrna9G3X8Z7 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chrna9G3X8Z7 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chrna9G3X8Z7 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chrna9G3X8Z7 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
Chrna9G3X8Z7 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chrna9G3X8Z7 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chrna9G3X8Z7 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chrna9G3X8Z7 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.67■□□□□ 0.42
Chrna9G3X8Z7 Gm15565-201ENSMUST00000118890 427 ntBASIC17.67■□□□□ 0.42
Chrna9G3X8Z7 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chrna9G3X8Z7 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.67■□□□□ 0.42
Chrna9G3X8Z7 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chrna9G3X8Z7 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.67■□□□□ 0.42
Chrna9G3X8Z7 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.67■□□□□ 0.42
Chrna9G3X8Z7 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chrna9G3X8Z7 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chrna9G3X8Z7 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chrna9G3X8Z7 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chrna9G3X8Z7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chrna9G3X8Z7 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.67■□□□□ 0.42
Chrna9G3X8Z7 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chrna9G3X8Z7 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Chrna9G3X8Z7 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Chrna9G3X8Z7 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Chrna9G3X8Z7 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chrna9G3X8Z7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chrna9G3X8Z7 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chrna9G3X8Z7 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Chrna9G3X8Z7 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Chrna9G3X8Z7 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.66■□□□□ 0.42
Chrna9G3X8Z7 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.66■□□□□ 0.42
Chrna9G3X8Z7 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chrna9G3X8Z7 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Chrna9G3X8Z7 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.66■□□□□ 0.42
Chrna9G3X8Z7 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chrna9G3X8Z7 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chrna9G3X8Z7 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chrna9G3X8Z7 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Chrna9G3X8Z7 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chrna9G3X8Z7 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chrna9G3X8Z7 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Chrna9G3X8Z7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.66■□□□□ 0.42
Chrna9G3X8Z7 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chrna9G3X8Z7 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chrna9G3X8Z7 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chrna9G3X8Z7 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chrna9G3X8Z7 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Chrna9G3X8Z7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chrna9G3X8Z7 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.65■□□□□ 0.42
Chrna9G3X8Z7 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chrna9G3X8Z7 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Chrna9G3X8Z7 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chrna9G3X8Z7 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.65■□□□□ 0.42
Chrna9G3X8Z7 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Chrna9G3X8Z7 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chrna9G3X8Z7 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms