Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Colca2F8VPY8 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Colca2F8VPY8 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.56■□□□□ 0.08
Colca2F8VPY8 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Colca2F8VPY8 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.56■□□□□ 0.08
Colca2F8VPY8 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Colca2F8VPY8 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Colca2F8VPY8 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.56■□□□□ 0.08
Colca2F8VPY8 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Colca2F8VPY8 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Colca2F8VPY8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Colca2F8VPY8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Colca2F8VPY8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Colca2F8VPY8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.55■□□□□ 0.08
Colca2F8VPY8 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Colca2F8VPY8 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Colca2F8VPY8 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Colca2F8VPY8 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Colca2F8VPY8 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Colca2F8VPY8 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Colca2F8VPY8 Gm17271-201ENSMUST00000165535 355 ntBASIC15.55■□□□□ 0.08
Colca2F8VPY8 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Colca2F8VPY8 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Colca2F8VPY8 Gm27300-201ENSMUST00000184085 97 ntBASIC15.55■□□□□ 0.08
Colca2F8VPY8 Gm27335-201ENSMUST00000184758 97 ntBASIC15.55■□□□□ 0.08
Colca2F8VPY8 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.55■□□□□ 0.08
Colca2F8VPY8 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Colca2F8VPY8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Colca2F8VPY8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Colca2F8VPY8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Colca2F8VPY8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Colca2F8VPY8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Colca2F8VPY8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Colca2F8VPY8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Colca2F8VPY8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Colca2F8VPY8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Colca2F8VPY8 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Colca2F8VPY8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Colca2F8VPY8 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.54■□□□□ 0.08
Colca2F8VPY8 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Colca2F8VPY8 Gm37153-201ENSMUST00000193637 231 ntBASIC15.54■□□□□ 0.08
Colca2F8VPY8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.54■□□□□ 0.08
Colca2F8VPY8 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Colca2F8VPY8 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Colca2F8VPY8 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.54■□□□□ 0.08
Colca2F8VPY8 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Colca2F8VPY8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Colca2F8VPY8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Colca2F8VPY8 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Colca2F8VPY8 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.53■□□□□ 0.08
Colca2F8VPY8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Colca2F8VPY8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Colca2F8VPY8 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Colca2F8VPY8 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Colca2F8VPY8 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.53■□□□□ 0.08
Colca2F8VPY8 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.53■□□□□ 0.08
Colca2F8VPY8 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.53■□□□□ 0.08
Colca2F8VPY8 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.53■□□□□ 0.08
Colca2F8VPY8 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.53■□□□□ 0.08
Colca2F8VPY8 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.53■□□□□ 0.08
Colca2F8VPY8 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.53■□□□□ 0.08
Colca2F8VPY8 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Colca2F8VPY8 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.53■□□□□ 0.08
Colca2F8VPY8 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.53■□□□□ 0.08
Colca2F8VPY8 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.53■□□□□ 0.08
Colca2F8VPY8 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.53■□□□□ 0.08
Colca2F8VPY8 Gm8825-201ENSMUST00000182565 998 ntBASIC15.53■□□□□ 0.08
Colca2F8VPY8 Gm4518-201ENSMUST00000182638 718 ntBASIC15.53■□□□□ 0.08
Colca2F8VPY8 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.53■□□□□ 0.08
Colca2F8VPY8 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.53■□□□□ 0.08
Colca2F8VPY8 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.53■□□□□ 0.08
Colca2F8VPY8 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.53■□□□□ 0.08
Colca2F8VPY8 Gm45167-201ENSMUST00000208007 322 ntBASIC15.53■□□□□ 0.08
Colca2F8VPY8 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Colca2F8VPY8 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.53■□□□□ 0.08
Colca2F8VPY8 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.53■□□□□ 0.08
Colca2F8VPY8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Colca2F8VPY8 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Colca2F8VPY8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Colca2F8VPY8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Colca2F8VPY8 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Colca2F8VPY8 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.52■□□□□ 0.08
Colca2F8VPY8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Colca2F8VPY8 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Colca2F8VPY8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Colca2F8VPY8 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Colca2F8VPY8 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Colca2F8VPY8 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.52■□□□□ 0.08
Colca2F8VPY8 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Colca2F8VPY8 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Colca2F8VPY8 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.52■□□□□ 0.08
Colca2F8VPY8 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.52■□□□□ 0.08
Colca2F8VPY8 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.52■□□□□ 0.08
Colca2F8VPY8 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Colca2F8VPY8 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Colca2F8VPY8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.52■□□□□ 0.07
Colca2F8VPY8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Colca2F8VPY8 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Colca2F8VPY8 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
Colca2F8VPY8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms