Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.89■□□□□ 0.29
Pcdh9F8VPK8 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.89■□□□□ 0.29
Pcdh9F8VPK8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh9F8VPK8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh9F8VPK8 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh9F8VPK8 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh9F8VPK8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh9F8VPK8 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh9F8VPK8 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh9F8VPK8 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh9F8VPK8 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh9F8VPK8 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Pcdh9F8VPK8 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdh9F8VPK8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Pcdh9F8VPK8 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh9F8VPK8 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh9F8VPK8 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh9F8VPK8 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh9F8VPK8 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Pcdh9F8VPK8 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh9F8VPK8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh9F8VPK8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh9F8VPK8 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.88■□□□□ 0.29
Pcdh9F8VPK8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdh9F8VPK8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh9F8VPK8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh9F8VPK8 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Pcdh9F8VPK8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh9F8VPK8 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh9F8VPK8 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh9F8VPK8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh9F8VPK8 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.88■□□□□ 0.29
Pcdh9F8VPK8 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh9F8VPK8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdh9F8VPK8 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Pcdh9F8VPK8 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh9F8VPK8 Phf7-203ENSMUST00000226565 1971 ntBASIC16.88■□□□□ 0.29
Pcdh9F8VPK8 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh9F8VPK8 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh9F8VPK8 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh9F8VPK8 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh9F8VPK8 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh9F8VPK8 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh9F8VPK8 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.87■□□□□ 0.29
Pcdh9F8VPK8 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.87■□□□□ 0.29
Pcdh9F8VPK8 Gm10252-201ENSMUST00000209541 832 ntBASIC16.87■□□□□ 0.29
Pcdh9F8VPK8 Gm18115-201ENSMUST00000221209 621 ntBASIC16.87■□□□□ 0.29
Pcdh9F8VPK8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Pcdh9F8VPK8 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh9F8VPK8 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pcdh9F8VPK8 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh9F8VPK8 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh9F8VPK8 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh9F8VPK8 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh9F8VPK8 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh9F8VPK8 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcdh9F8VPK8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh9F8VPK8 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh9F8VPK8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh9F8VPK8 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh9F8VPK8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.86■□□□□ 0.29
Pcdh9F8VPK8 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh9F8VPK8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.86■□□□□ 0.29
Pcdh9F8VPK8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Pcdh9F8VPK8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh9F8VPK8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh9F8VPK8 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh9F8VPK8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Pcdh9F8VPK8 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh9F8VPK8 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh9F8VPK8 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh9F8VPK8 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh9F8VPK8 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Pcdh9F8VPK8 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh9F8VPK8 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh9F8VPK8 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.86■□□□□ 0.29
Pcdh9F8VPK8 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh9F8VPK8 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh9F8VPK8 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh9F8VPK8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh9F8VPK8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Pcdh9F8VPK8 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh9F8VPK8 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh9F8VPK8 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh9F8VPK8 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh9F8VPK8 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh9F8VPK8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.85■□□□□ 0.29
Pcdh9F8VPK8 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh9F8VPK8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh9F8VPK8 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh9F8VPK8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.85■□□□□ 0.29
Pcdh9F8VPK8 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
Pcdh9F8VPK8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Pcdh9F8VPK8 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh9F8VPK8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh9F8VPK8 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.85■□□□□ 0.29
Pcdh9F8VPK8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Pcdh9F8VPK8 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh9F8VPK8 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Pcdh9F8VPK8 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms