Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdh1F7BJK1 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdh1F7BJK1 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdh1F7BJK1 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdh1F7BJK1 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdh1F7BJK1 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdh1F7BJK1 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdh1F7BJK1 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdh1F7BJK1 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh1F7BJK1 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh1F7BJK1 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Pcdh1F7BJK1 Gm7638-201ENSMUST00000121348 967 ntBASIC14.83□□□□□ -0.04
Pcdh1F7BJK1 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.83□□□□□ -0.04
Pcdh1F7BJK1 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh1F7BJK1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.83□□□□□ -0.04
Pcdh1F7BJK1 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh1F7BJK1 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh1F7BJK1 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh1F7BJK1 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh1F7BJK1 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Pcdh1F7BJK1 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh1F7BJK1 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Pcdh1F7BJK1 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Pcdh1F7BJK1 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdh1F7BJK1 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdh1F7BJK1 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdh1F7BJK1 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh1F7BJK1 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Pcdh1F7BJK1 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh1F7BJK1 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh1F7BJK1 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh1F7BJK1 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh1F7BJK1 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh1F7BJK1 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Pcdh1F7BJK1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh1F7BJK1 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.82□□□□□ -0.04
Pcdh1F7BJK1 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pcdh1F7BJK1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh1F7BJK1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh1F7BJK1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Pcdh1F7BJK1 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Pcdh1F7BJK1 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh1F7BJK1 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh1F7BJK1 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdh1F7BJK1 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh1F7BJK1 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh1F7BJK1 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh1F7BJK1 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh1F7BJK1 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh1F7BJK1 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh1F7BJK1 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh1F7BJK1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh1F7BJK1 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh1F7BJK1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh1F7BJK1 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh1F7BJK1 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.81□□□□□ -0.04
Pcdh1F7BJK1 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh1F7BJK1 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh1F7BJK1 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pcdh1F7BJK1 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh1F7BJK1 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh1F7BJK1 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Pcdh1F7BJK1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.81□□□□□ -0.04
Pcdh1F7BJK1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh1F7BJK1 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh1F7BJK1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh1F7BJK1 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh1F7BJK1 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh1F7BJK1 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh1F7BJK1 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh1F7BJK1 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms