Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc149F6V035 Gm18195-201ENSMUST00000207604 706 ntBASIC16.68■□□□□ 0.26
Ccdc149F6V035 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc149F6V035 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc149F6V035 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.68■□□□□ 0.26
Ccdc149F6V035 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc149F6V035 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc149F6V035 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc149F6V035 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc149F6V035 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc149F6V035 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc149F6V035 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc149F6V035 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.68■□□□□ 0.26
Ccdc149F6V035 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc149F6V035 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc149F6V035 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc149F6V035 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.67■□□□□ 0.26
Ccdc149F6V035 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc149F6V035 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc149F6V035 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc149F6V035 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc149F6V035 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc149F6V035 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Ccdc149F6V035 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc149F6V035 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.67■□□□□ 0.26
Ccdc149F6V035 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Ccdc149F6V035 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc149F6V035 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.67■□□□□ 0.26
Ccdc149F6V035 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc149F6V035 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
Ccdc149F6V035 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc149F6V035 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.67■□□□□ 0.26
Ccdc149F6V035 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.67■□□□□ 0.26
Ccdc149F6V035 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.67■□□□□ 0.26
Ccdc149F6V035 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc149F6V035 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc149F6V035 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc149F6V035 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc149F6V035 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc149F6V035 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.66■□□□□ 0.26
Ccdc149F6V035 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc149F6V035 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc149F6V035 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.66■□□□□ 0.26
Ccdc149F6V035 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc149F6V035 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc149F6V035 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.66■□□□□ 0.26
Ccdc149F6V035 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc149F6V035 Gm11452-201ENSMUST00000122376 690 ntBASIC16.66■□□□□ 0.26
Ccdc149F6V035 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.66■□□□□ 0.26
Ccdc149F6V035 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc149F6V035 Gm27867-201ENSMUST00000184778 125 ntBASIC16.66■□□□□ 0.26
Ccdc149F6V035 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc149F6V035 Rps4l-201ENSMUST00000071745 943 ntBASIC16.66■□□□□ 0.26
Ccdc149F6V035 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Ccdc149F6V035 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc149F6V035 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.66■□□□□ 0.26
Ccdc149F6V035 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc149F6V035 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc149F6V035 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc149F6V035 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ccdc149F6V035 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc149F6V035 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc149F6V035 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Ccdc149F6V035 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc149F6V035 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc149F6V035 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc149F6V035 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ccdc149F6V035 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.65■□□□□ 0.26
Ccdc149F6V035 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc149F6V035 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.65■□□□□ 0.26
Ccdc149F6V035 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc149F6V035 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc149F6V035 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc149F6V035 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc149F6V035 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc149F6V035 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc149F6V035 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc149F6V035 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ccdc149F6V035 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Ccdc149F6V035 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc149F6V035 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc149F6V035 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc149F6V035 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Ccdc149F6V035 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc149F6V035 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc149F6V035 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Ccdc149F6V035 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc149F6V035 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc149F6V035 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.64■□□□□ 0.25
Ccdc149F6V035 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc149F6V035 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.64■□□□□ 0.25
Ccdc149F6V035 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc149F6V035 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc149F6V035 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc149F6V035 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc149F6V035 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.64■□□□□ 0.25
Ccdc149F6V035 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc149F6V035 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc149F6V035 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc149F6V035 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms