Protein–RNA interactions for Protein: F6SW83

Gm10477, Predicted gene 10477, mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10477F6SW83 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm10477F6SW83 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Gm10477F6SW83 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm10477F6SW83 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm10477F6SW83 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Gm10477F6SW83 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm10477F6SW83 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Gm10477F6SW83 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Gm10477F6SW83 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Gm10477F6SW83 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm10477F6SW83 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gm10477F6SW83 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.33■□□□□ 0.04
Gm10477F6SW83 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
Gm10477F6SW83 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm10477F6SW83 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm10477F6SW83 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm10477F6SW83 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm10477F6SW83 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm10477F6SW83 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Gm10477F6SW83 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm10477F6SW83 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm10477F6SW83 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm10477F6SW83 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm10477F6SW83 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm10477F6SW83 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm10477F6SW83 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm10477F6SW83 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm10477F6SW83 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm10477F6SW83 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.32■□□□□ 0.04
Gm10477F6SW83 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm10477F6SW83 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm10477F6SW83 Gm2399-201ENSMUST00000104944 225 ntBASIC15.32■□□□□ 0.04
Gm10477F6SW83 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC15.32■□□□□ 0.04
Gm10477F6SW83 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm10477F6SW83 Gm42778-201ENSMUST00000199644 553 ntBASIC15.32■□□□□ 0.04
Gm10477F6SW83 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm10477F6SW83 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm10477F6SW83 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm10477F6SW83 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm10477F6SW83 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm10477F6SW83 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm10477F6SW83 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm10477F6SW83 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.32■□□□□ 0.04
Gm10477F6SW83 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm10477F6SW83 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm10477F6SW83 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Gm10477F6SW83 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Gm10477F6SW83 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.32■□□□□ 0.04
Gm10477F6SW83 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.32■□□□□ 0.04
Gm10477F6SW83 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm10477F6SW83 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm10477F6SW83 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm10477F6SW83 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm10477F6SW83 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm10477F6SW83 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm10477F6SW83 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm10477F6SW83 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm10477F6SW83 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm10477F6SW83 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm10477F6SW83 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm10477F6SW83 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm10477F6SW83 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm10477F6SW83 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm10477F6SW83 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.31■□□□□ 0.04
Gm10477F6SW83 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.31■□□□□ 0.04
Gm10477F6SW83 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Gm10477F6SW83 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm10477F6SW83 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Gm10477F6SW83 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.31■□□□□ 0.04
Gm10477F6SW83 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm10477F6SW83 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm10477F6SW83 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm10477F6SW83 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm10477F6SW83 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm10477F6SW83 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm10477F6SW83 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm10477F6SW83 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm10477F6SW83 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm10477F6SW83 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.3■□□□□ 0.04
Gm10477F6SW83 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm10477F6SW83 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm10477F6SW83 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm10477F6SW83 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Gm10477F6SW83 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Gm10477F6SW83 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm10477F6SW83 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.3■□□□□ 0.04
Gm10477F6SW83 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm10477F6SW83 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm10477F6SW83 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm10477F6SW83 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm10477F6SW83 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm10477F6SW83 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm10477F6SW83 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm10477F6SW83 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.3■□□□□ 0.04
Gm10477F6SW83 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm10477F6SW83 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm10477F6SW83 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm10477F6SW83 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gm10477F6SW83 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm10477F6SW83 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms