Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ube4aE9Q735 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ube4aE9Q735 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ube4aE9Q735 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ube4aE9Q735 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Ube4aE9Q735 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ube4aE9Q735 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ube4aE9Q735 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Ube4aE9Q735 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube4aE9Q735 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube4aE9Q735 AC132265.1-201ENSMUST00000219233 1665 ntBASIC19.72■□□□□ 0.75
Ube4aE9Q735 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ube4aE9Q735 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ube4aE9Q735 Gm37584-201ENSMUST00000193595 1290 ntBASIC19.72■□□□□ 0.75
Ube4aE9Q735 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube4aE9Q735 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube4aE9Q735 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube4aE9Q735 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube4aE9Q735 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube4aE9Q735 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.72■□□□□ 0.75
Ube4aE9Q735 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube4aE9Q735 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube4aE9Q735 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube4aE9Q735 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ube4aE9Q735 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ube4aE9Q735 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ube4aE9Q735 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ube4aE9Q735 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ube4aE9Q735 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ube4aE9Q735 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ube4aE9Q735 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ube4aE9Q735 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ube4aE9Q735 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC19.71■□□□□ 0.75
Ube4aE9Q735 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC19.71■□□□□ 0.75
Ube4aE9Q735 Gm7230-201ENSMUST00000173026 815 ntBASIC19.71■□□□□ 0.75
Ube4aE9Q735 Mir5126-201ENSMUST00000175513 77 ntBASIC19.71■□□□□ 0.75
Ube4aE9Q735 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
Ube4aE9Q735 Gm5712-201ENSMUST00000199748 1043 ntBASIC19.71■□□□□ 0.75
Ube4aE9Q735 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC19.71■□□□□ 0.75
Ube4aE9Q735 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC19.71■□□□□ 0.75
Ube4aE9Q735 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ube4aE9Q735 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ube4aE9Q735 Gm6858-201ENSMUST00000208582 1468 ntBASIC19.71■□□□□ 0.75
Ube4aE9Q735 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.71■□□□□ 0.75
Ube4aE9Q735 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC19.71■□□□□ 0.75
Ube4aE9Q735 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ube4aE9Q735 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ube4aE9Q735 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ube4aE9Q735 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ube4aE9Q735 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ube4aE9Q735 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ube4aE9Q735 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ube4aE9Q735 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ube4aE9Q735 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ube4aE9Q735 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ube4aE9Q735 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Ube4aE9Q735 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC19.7■□□□□ 0.74
Ube4aE9Q735 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC19.7■□□□□ 0.74
Ube4aE9Q735 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC19.7■□□□□ 0.74
Ube4aE9Q735 Gm8655-201ENSMUST00000221159 852 ntBASIC19.7■□□□□ 0.74
Ube4aE9Q735 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ube4aE9Q735 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ube4aE9Q735 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ube4aE9Q735 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.7■□□□□ 0.74
Ube4aE9Q735 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ube4aE9Q735 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ube4aE9Q735 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Ube4aE9Q735 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ube4aE9Q735 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ube4aE9Q735 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ube4aE9Q735 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC19.69■□□□□ 0.74
Ube4aE9Q735 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ube4aE9Q735 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ube4aE9Q735 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ube4aE9Q735 Gm8097-201ENSMUST00000117903 829 ntBASIC19.69■□□□□ 0.74
Ube4aE9Q735 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC19.69■□□□□ 0.74
Ube4aE9Q735 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC19.69■□□□□ 0.74
Ube4aE9Q735 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ube4aE9Q735 Mir6404-201ENSMUST00000183699 94 ntBASIC19.69■□□□□ 0.74
Ube4aE9Q735 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
Ube4aE9Q735 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ube4aE9Q735 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Ube4aE9Q735 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ube4aE9Q735 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ube4aE9Q735 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ube4aE9Q735 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ube4aE9Q735 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ube4aE9Q735 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ube4aE9Q735 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ube4aE9Q735 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Ube4aE9Q735 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Ube4aE9Q735 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ube4aE9Q735 Gm11780-201ENSMUST00000136880 516 ntBASIC19.68■□□□□ 0.74
Ube4aE9Q735 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ube4aE9Q735 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Ube4aE9Q735 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ube4aE9Q735 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ube4aE9Q735 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ube4aE9Q735 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ube4aE9Q735 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms