Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb9E9Q5G2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb9E9Q5G2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb9E9Q5G2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb9E9Q5G2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb9E9Q5G2 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb9E9Q5G2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb9E9Q5G2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.34■□□□□ 0.69
Pcdhb9E9Q5G2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb9E9Q5G2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Pcdhb9E9Q5G2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.33■□□□□ 0.69
Pcdhb9E9Q5G2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhb9E9Q5G2 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhb9E9Q5G2 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.33■□□□□ 0.68
Pcdhb9E9Q5G2 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.33■□□□□ 0.68
Pcdhb9E9Q5G2 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb9E9Q5G2 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb9E9Q5G2 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb9E9Q5G2 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb9E9Q5G2 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Pcdhb9E9Q5G2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb9E9Q5G2 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb9E9Q5G2 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb9E9Q5G2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb9E9Q5G2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb9E9Q5G2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Pcdhb9E9Q5G2 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.33■□□□□ 0.68
Pcdhb9E9Q5G2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb9E9Q5G2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb9E9Q5G2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb9E9Q5G2 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb9E9Q5G2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb9E9Q5G2 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pcdhb9E9Q5G2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pcdhb9E9Q5G2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb9E9Q5G2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb9E9Q5G2 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb9E9Q5G2 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb9E9Q5G2 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb9E9Q5G2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pcdhb9E9Q5G2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb9E9Q5G2 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb9E9Q5G2 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.32■□□□□ 0.68
Pcdhb9E9Q5G2 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb9E9Q5G2 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.32■□□□□ 0.68
Pcdhb9E9Q5G2 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb9E9Q5G2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb9E9Q5G2 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb9E9Q5G2 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.32■□□□□ 0.68
Pcdhb9E9Q5G2 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb9E9Q5G2 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb9E9Q5G2 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb9E9Q5G2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Pcdhb9E9Q5G2 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb9E9Q5G2 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb9E9Q5G2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb9E9Q5G2 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb9E9Q5G2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb9E9Q5G2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.31■□□□□ 0.68
Pcdhb9E9Q5G2 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb9E9Q5G2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb9E9Q5G2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb9E9Q5G2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb9E9Q5G2 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.31■□□□□ 0.68
Pcdhb9E9Q5G2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb9E9Q5G2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.31■□□□□ 0.68
Pcdhb9E9Q5G2 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Pcdhb9E9Q5G2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb9E9Q5G2 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb9E9Q5G2 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb9E9Q5G2 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb9E9Q5G2 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb9E9Q5G2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb9E9Q5G2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Pcdhb9E9Q5G2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Pcdhb9E9Q5G2 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb9E9Q5G2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb9E9Q5G2 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb9E9Q5G2 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb9E9Q5G2 Gm12895-201ENSMUST00000122214 226 ntBASIC19.3■□□□□ 0.68
Pcdhb9E9Q5G2 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
Pcdhb9E9Q5G2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.3■□□□□ 0.68
Pcdhb9E9Q5G2 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.3■□□□□ 0.68
Pcdhb9E9Q5G2 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb9E9Q5G2 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb9E9Q5G2 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb9E9Q5G2 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb9E9Q5G2 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb9E9Q5G2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb9E9Q5G2 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb9E9Q5G2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb9E9Q5G2 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb9E9Q5G2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb9E9Q5G2 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb9E9Q5G2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb9E9Q5G2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb9E9Q5G2 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb9E9Q5G2 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.29■□□□□ 0.68
Pcdhb9E9Q5G2 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb9E9Q5G2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms