Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28043E0CXC2 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28043E0CXC2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28043E0CXC2 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Gm28043E0CXC2 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.54■□□□□ 0.24
Gm28043E0CXC2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28043E0CXC2 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28043E0CXC2 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28043E0CXC2 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28043E0CXC2 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28043E0CXC2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28043E0CXC2 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Gm28043E0CXC2 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28043E0CXC2 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28043E0CXC2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.54■□□□□ 0.24
Gm28043E0CXC2 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28043E0CXC2 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28043E0CXC2 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28043E0CXC2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Gm28043E0CXC2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm28043E0CXC2 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.53■□□□□ 0.24
Gm28043E0CXC2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm28043E0CXC2 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Gm28043E0CXC2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm28043E0CXC2 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm28043E0CXC2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.53■□□□□ 0.24
Gm28043E0CXC2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.53■□□□□ 0.24
Gm28043E0CXC2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.53■□□□□ 0.24
Gm28043E0CXC2 Gm38027-201ENSMUST00000192315 235 ntBASIC16.53■□□□□ 0.24
Gm28043E0CXC2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.53■□□□□ 0.24
Gm28043E0CXC2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.53■□□□□ 0.24
Gm28043E0CXC2 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.53■□□□□ 0.24
Gm28043E0CXC2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm28043E0CXC2 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm28043E0CXC2 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm28043E0CXC2 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm28043E0CXC2 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm28043E0CXC2 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm28043E0CXC2 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm28043E0CXC2 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm28043E0CXC2 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Gm28043E0CXC2 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm28043E0CXC2 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm28043E0CXC2 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Gm28043E0CXC2 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Gm28043E0CXC2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.52■□□□□ 0.24
Gm28043E0CXC2 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm28043E0CXC2 Gm37025-201ENSMUST00000195159 829 ntBASIC16.52■□□□□ 0.24
Gm28043E0CXC2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm28043E0CXC2 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Gm28043E0CXC2 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Gm28043E0CXC2 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Gm28043E0CXC2 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Gm28043E0CXC2 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm28043E0CXC2 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm28043E0CXC2 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Gm28043E0CXC2 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm28043E0CXC2 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Gm28043E0CXC2 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm28043E0CXC2 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm28043E0CXC2 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Gm28043E0CXC2 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm28043E0CXC2 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Gm28043E0CXC2 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Gm28043E0CXC2 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.51■□□□□ 0.23
Gm28043E0CXC2 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm28043E0CXC2 Gm12085-201ENSMUST00000119263 940 ntBASIC16.51■□□□□ 0.23
Gm28043E0CXC2 Gm3375-201ENSMUST00000203929 796 ntBASIC16.51■□□□□ 0.23
Gm28043E0CXC2 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Gm28043E0CXC2 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.51■□□□□ 0.23
Gm28043E0CXC2 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm28043E0CXC2 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm28043E0CXC2 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.51■□□□□ 0.23
Gm28043E0CXC2 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.51■□□□□ 0.23
Gm28043E0CXC2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm28043E0CXC2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Gm28043E0CXC2 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm28043E0CXC2 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Gm28043E0CXC2 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Gm28043E0CXC2 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm28043E0CXC2 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Gm28043E0CXC2 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Gm28043E0CXC2 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm28043E0CXC2 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.5■□□□□ 0.23
Gm28043E0CXC2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm28043E0CXC2 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm28043E0CXC2 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm28043E0CXC2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm28043E0CXC2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Gm28043E0CXC2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Gm28043E0CXC2 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm28043E0CXC2 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Gm28043E0CXC2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm28043E0CXC2 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm28043E0CXC2 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm28043E0CXC2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm28043E0CXC2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm28043E0CXC2 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Gm28043E0CXC2 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Gm28043E0CXC2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms