Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shank1D3YZU1 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Shank1D3YZU1 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.71□□□□□ -0.05
Shank1D3YZU1 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Shank1D3YZU1 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shank1D3YZU1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Shank1D3YZU1 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.71□□□□□ -0.05
Shank1D3YZU1 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shank1D3YZU1 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shank1D3YZU1 Gm4535-201ENSMUST00000182274 558 ntBASIC14.71□□□□□ -0.05
Shank1D3YZU1 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Shank1D3YZU1 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shank1D3YZU1 Gm10355-201ENSMUST00000097146 517 ntBASIC14.71□□□□□ -0.05
Shank1D3YZU1 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.71□□□□□ -0.06
Shank1D3YZU1 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Shank1D3YZU1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Shank1D3YZU1 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Shank1D3YZU1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Shank1D3YZU1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Shank1D3YZU1 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Shank1D3YZU1 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shank1D3YZU1 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shank1D3YZU1 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Shank1D3YZU1 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shank1D3YZU1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shank1D3YZU1 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Shank1D3YZU1 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Shank1D3YZU1 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shank1D3YZU1 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Shank1D3YZU1 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Shank1D3YZU1 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shank1D3YZU1 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.7□□□□□ -0.06
Shank1D3YZU1 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shank1D3YZU1 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Shank1D3YZU1 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Shank1D3YZU1 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shank1D3YZU1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shank1D3YZU1 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shank1D3YZU1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shank1D3YZU1 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.7□□□□□ -0.06
Shank1D3YZU1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Shank1D3YZU1 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shank1D3YZU1 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shank1D3YZU1 Gm10576-201ENSMUST00000191927 825 ntBASIC14.7□□□□□ -0.06
Shank1D3YZU1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Shank1D3YZU1 Rarb-207ENSMUST00000225921 2756 ntBASIC14.7□□□□□ -0.06
Shank1D3YZU1 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shank1D3YZU1 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Shank1D3YZU1 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shank1D3YZU1 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shank1D3YZU1 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shank1D3YZU1 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shank1D3YZU1 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.69□□□□□ -0.06
Shank1D3YZU1 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.69□□□□□ -0.06
Shank1D3YZU1 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.69□□□□□ -0.06
Shank1D3YZU1 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Shank1D3YZU1 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shank1D3YZU1 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Shank1D3YZU1 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Shank1D3YZU1 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shank1D3YZU1 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shank1D3YZU1 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shank1D3YZU1 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shank1D3YZU1 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.68□□□□□ -0.06
Shank1D3YZU1 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Shank1D3YZU1 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.68□□□□□ -0.06
Shank1D3YZU1 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Shank1D3YZU1 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.68□□□□□ -0.06
Shank1D3YZU1 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.68□□□□□ -0.06
Shank1D3YZU1 Gm15590-201ENSMUST00000078419 552 ntBASIC14.68□□□□□ -0.06
Shank1D3YZU1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Shank1D3YZU1 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shank1D3YZU1 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shank1D3YZU1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shank1D3YZU1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shank1D3YZU1 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Shank1D3YZU1 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Shank1D3YZU1 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
Shank1D3YZU1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Shank1D3YZU1 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Shank1D3YZU1 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shank1D3YZU1 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.68□□□□□ -0.06
Shank1D3YZU1 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Shank1D3YZU1 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.68□□□□□ -0.06
Shank1D3YZU1 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shank1D3YZU1 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.68□□□□□ -0.06
Shank1D3YZU1 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shank1D3YZU1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.68□□□□□ -0.06
Shank1D3YZU1 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.68□□□□□ -0.06
Shank1D3YZU1 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shank1D3YZU1 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Shank1D3YZU1 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shank1D3YZU1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shank1D3YZU1 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.67□□□□□ -0.06
Shank1D3YZU1 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.67□□□□□ -0.06
Shank1D3YZU1 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.67□□□□□ -0.06
Shank1D3YZU1 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shank1D3YZU1 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Shank1D3YZU1 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shank1D3YZU1 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms