Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx8D3YU81 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Rfx8D3YU81 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Rfx8D3YU81 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx8D3YU81 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx8D3YU81 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx8D3YU81 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx8D3YU81 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx8D3YU81 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx8D3YU81 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx8D3YU81 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx8D3YU81 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx8D3YU81 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx8D3YU81 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx8D3YU81 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Rfx8D3YU81 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx8D3YU81 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx8D3YU81 Gm44450-201ENSMUST00000199528 114 ntBASIC17.43■□□□□ 0.38
Rfx8D3YU81 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx8D3YU81 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx8D3YU81 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx8D3YU81 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx8D3YU81 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx8D3YU81 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Rfx8D3YU81 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Rfx8D3YU81 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx8D3YU81 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Rfx8D3YU81 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx8D3YU81 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx8D3YU81 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx8D3YU81 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx8D3YU81 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rfx8D3YU81 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx8D3YU81 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx8D3YU81 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx8D3YU81 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx8D3YU81 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Rfx8D3YU81 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Rfx8D3YU81 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx8D3YU81 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.42■□□□□ 0.38
Rfx8D3YU81 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx8D3YU81 Gm6659-201ENSMUST00000174752 547 ntBASIC17.42■□□□□ 0.38
Rfx8D3YU81 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.42■□□□□ 0.38
Rfx8D3YU81 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.42■□□□□ 0.38
Rfx8D3YU81 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx8D3YU81 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx8D3YU81 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx8D3YU81 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx8D3YU81 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.42■□□□□ 0.38
Rfx8D3YU81 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.42■□□□□ 0.38
Rfx8D3YU81 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx8D3YU81 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx8D3YU81 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rfx8D3YU81 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx8D3YU81 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.42■□□□□ 0.38
Rfx8D3YU81 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx8D3YU81 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx8D3YU81 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx8D3YU81 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx8D3YU81 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Rfx8D3YU81 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx8D3YU81 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Rfx8D3YU81 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx8D3YU81 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx8D3YU81 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.41■□□□□ 0.38
Rfx8D3YU81 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Rfx8D3YU81 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Rfx8D3YU81 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx8D3YU81 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx8D3YU81 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.41■□□□□ 0.38
Rfx8D3YU81 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.41■□□□□ 0.38
Rfx8D3YU81 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx8D3YU81 Gm37722-201ENSMUST00000193757 208 ntBASIC17.41■□□□□ 0.38
Rfx8D3YU81 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx8D3YU81 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Rfx8D3YU81 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx8D3YU81 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx8D3YU81 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx8D3YU81 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx8D3YU81 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx8D3YU81 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rfx8D3YU81 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.4■□□□□ 0.38
Rfx8D3YU81 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx8D3YU81 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx8D3YU81 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx8D3YU81 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx8D3YU81 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.4■□□□□ 0.38
Rfx8D3YU81 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx8D3YU81 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx8D3YU81 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.4■□□□□ 0.38
Rfx8D3YU81 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx8D3YU81 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx8D3YU81 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx8D3YU81 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx8D3YU81 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rfx8D3YU81 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx8D3YU81 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx8D3YU81 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.4■□□□□ 0.38
Rfx8D3YU81 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx8D3YU81 Gm25016-201ENSMUST00000158399 131 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms