Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a6B1AVK5 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a6B1AVK5 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a6B1AVK5 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a6B1AVK5 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.86■□□□□ 0.29
Col4a6B1AVK5 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Col4a6B1AVK5 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Col4a6B1AVK5 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a6B1AVK5 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a6B1AVK5 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a6B1AVK5 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a6B1AVK5 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a6B1AVK5 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a6B1AVK5 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Col4a6B1AVK5 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.85■□□□□ 0.29
Col4a6B1AVK5 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a6B1AVK5 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Col4a6B1AVK5 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.85■□□□□ 0.29
Col4a6B1AVK5 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.85■□□□□ 0.29
Col4a6B1AVK5 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Col4a6B1AVK5 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a6B1AVK5 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a6B1AVK5 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.85■□□□□ 0.29
Col4a6B1AVK5 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a6B1AVK5 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.85■□□□□ 0.29
Col4a6B1AVK5 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.85■□□□□ 0.29
Col4a6B1AVK5 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.85■□□□□ 0.29
Col4a6B1AVK5 Gm15920-201ENSMUST00000118998 402 ntBASIC16.85■□□□□ 0.29
Col4a6B1AVK5 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Col4a6B1AVK5 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.85■□□□□ 0.29
Col4a6B1AVK5 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a6B1AVK5 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.85■□□□□ 0.29
Col4a6B1AVK5 Gm5186-201ENSMUST00000218781 920 ntBASIC16.85■□□□□ 0.29
Col4a6B1AVK5 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.85■□□□□ 0.29
Col4a6B1AVK5 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a6B1AVK5 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a6B1AVK5 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.84■□□□□ 0.29
Col4a6B1AVK5 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
Col4a6B1AVK5 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a6B1AVK5 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a6B1AVK5 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Col4a6B1AVK5 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Col4a6B1AVK5 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a6B1AVK5 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a6B1AVK5 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a6B1AVK5 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a6B1AVK5 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a6B1AVK5 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.84■□□□□ 0.29
Col4a6B1AVK5 Gm17968-201ENSMUST00000194902 784 ntBASIC16.84■□□□□ 0.29
Col4a6B1AVK5 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a6B1AVK5 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a6B1AVK5 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a6B1AVK5 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col4a6B1AVK5 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col4a6B1AVK5 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col4a6B1AVK5 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col4a6B1AVK5 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col4a6B1AVK5 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Col4a6B1AVK5 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.83■□□□□ 0.29
Col4a6B1AVK5 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.83■□□□□ 0.29
Col4a6B1AVK5 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Col4a6B1AVK5 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.83■□□□□ 0.29
Col4a6B1AVK5 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col4a6B1AVK5 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col4a6B1AVK5 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col4a6B1AVK5 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col4a6B1AVK5 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
Col4a6B1AVK5 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Col4a6B1AVK5 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col4a6B1AVK5 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col4a6B1AVK5 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col4a6B1AVK5 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Col4a6B1AVK5 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col4a6B1AVK5 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col4a6B1AVK5 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col4a6B1AVK5 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col4a6B1AVK5 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Col4a6B1AVK5 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Col4a6B1AVK5 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col4a6B1AVK5 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col4a6B1AVK5 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.83■□□□□ 0.28
Col4a6B1AVK5 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a6B1AVK5 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a6B1AVK5 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a6B1AVK5 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a6B1AVK5 Gm4899-201ENSMUST00000178708 719 ntBASIC16.82■□□□□ 0.28
Col4a6B1AVK5 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a6B1AVK5 Gm37153-201ENSMUST00000193637 231 ntBASIC16.82■□□□□ 0.28
Col4a6B1AVK5 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.82■□□□□ 0.28
Col4a6B1AVK5 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a6B1AVK5 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a6B1AVK5 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a6B1AVK5 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a6B1AVK5 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.82■□□□□ 0.28
Col4a6B1AVK5 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a6B1AVK5 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Col4a6B1AVK5 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a6B1AVK5 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a6B1AVK5 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a6B1AVK5 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms