Protein–RNA interactions for Protein: A2AJK6

Chd7, Chromodomain-helicase-DNA-binding protein 7, mousemouse

Known RBP Predictions only

Length 2,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd7A2AJK6 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd7A2AJK6 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd7A2AJK6 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Chd7A2AJK6 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.09■□□□□ 0.17
Chd7A2AJK6 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.09■□□□□ 0.17
Chd7A2AJK6 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd7A2AJK6 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd7A2AJK6 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd7A2AJK6 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd7A2AJK6 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.09■□□□□ 0.17
Chd7A2AJK6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd7A2AJK6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd7A2AJK6 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chd7A2AJK6 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd7A2AJK6 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chd7A2AJK6 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Chd7A2AJK6 Gm11424-201ENSMUST00000121929 829 ntBASIC16.08■□□□□ 0.17
Chd7A2AJK6 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.08■□□□□ 0.17
Chd7A2AJK6 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chd7A2AJK6 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chd7A2AJK6 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chd7A2AJK6 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Chd7A2AJK6 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chd7A2AJK6 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chd7A2AJK6 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd7A2AJK6 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd7A2AJK6 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd7A2AJK6 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd7A2AJK6 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.08■□□□□ 0.16
Chd7A2AJK6 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd7A2AJK6 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.08■□□□□ 0.16
Chd7A2AJK6 Gm8825-201ENSMUST00000182565 998 ntBASIC16.08■□□□□ 0.16
Chd7A2AJK6 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Chd7A2AJK6 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Chd7A2AJK6 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Chd7A2AJK6 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Chd7A2AJK6 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd7A2AJK6 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd7A2AJK6 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd7A2AJK6 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd7A2AJK6 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.07■□□□□ 0.16
Chd7A2AJK6 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Chd7A2AJK6 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd7A2AJK6 Gm27301-201ENSMUST00000184012 127 ntBASIC16.07■□□□□ 0.16
Chd7A2AJK6 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chd7A2AJK6 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.07■□□□□ 0.16
Chd7A2AJK6 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Chd7A2AJK6 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chd7A2AJK6 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd7A2AJK6 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd7A2AJK6 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Chd7A2AJK6 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chd7A2AJK6 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.07■□□□□ 0.16
Chd7A2AJK6 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.07■□□□□ 0.16
Chd7A2AJK6 Gm2423-201ENSMUST00000074863 733 ntBASIC16.07■□□□□ 0.16
Chd7A2AJK6 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Chd7A2AJK6 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chd7A2AJK6 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chd7A2AJK6 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chd7A2AJK6 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Chd7A2AJK6 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Chd7A2AJK6 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd7A2AJK6 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.06■□□□□ 0.16
Chd7A2AJK6 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.06■□□□□ 0.16
Chd7A2AJK6 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chd7A2AJK6 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd7A2AJK6 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd7A2AJK6 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd7A2AJK6 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd7A2AJK6 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.06■□□□□ 0.16
Chd7A2AJK6 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd7A2AJK6 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Chd7A2AJK6 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd7A2AJK6 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.06■□□□□ 0.16
Chd7A2AJK6 Mir6990-201ENSMUST00000183724 91 ntBASIC16.06■□□□□ 0.16
Chd7A2AJK6 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.06■□□□□ 0.16
Chd7A2AJK6 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chd7A2AJK6 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.06■□□□□ 0.16
Chd7A2AJK6 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd7A2AJK6 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd7A2AJK6 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd7A2AJK6 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Chd7A2AJK6 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chd7A2AJK6 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.05■□□□□ 0.16
Chd7A2AJK6 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd7A2AJK6 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd7A2AJK6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd7A2AJK6 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd7A2AJK6 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd7A2AJK6 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chd7A2AJK6 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chd7A2AJK6 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.05■□□□□ 0.16
Chd7A2AJK6 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chd7A2AJK6 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Chd7A2AJK6 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.05■□□□□ 0.16
Chd7A2AJK6 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.05■□□□□ 0.16
Chd7A2AJK6 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd7A2AJK6 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Chd7A2AJK6 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chd7A2AJK6 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms