Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
IsxA1A546 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
IsxA1A546 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IsxA1A546 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
IsxA1A546 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IsxA1A546 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC15.35■□□□□ 0.05
IsxA1A546 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IsxA1A546 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.35■□□□□ 0.05
IsxA1A546 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.35■□□□□ 0.05
IsxA1A546 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.35■□□□□ 0.05
IsxA1A546 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.35■□□□□ 0.05
IsxA1A546 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IsxA1A546 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IsxA1A546 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
IsxA1A546 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IsxA1A546 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.35■□□□□ 0.05
IsxA1A546 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
IsxA1A546 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IsxA1A546 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
IsxA1A546 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IsxA1A546 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
IsxA1A546 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.35■□□□□ 0.05
IsxA1A546 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
IsxA1A546 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
IsxA1A546 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
IsxA1A546 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IsxA1A546 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
IsxA1A546 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IsxA1A546 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
IsxA1A546 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IsxA1A546 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IsxA1A546 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
IsxA1A546 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IsxA1A546 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IsxA1A546 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IsxA1A546 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IsxA1A546 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IsxA1A546 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.34■□□□□ 0.05
IsxA1A546 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
IsxA1A546 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IsxA1A546 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.34■□□□□ 0.05
IsxA1A546 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IsxA1A546 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
IsxA1A546 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
IsxA1A546 Gm27011-201ENSMUST00000182352 972 ntBASIC15.34■□□□□ 0.05
IsxA1A546 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IsxA1A546 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
IsxA1A546 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
IsxA1A546 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
IsxA1A546 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.34■□□□□ 0.05
IsxA1A546 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
IsxA1A546 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IsxA1A546 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IsxA1A546 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IsxA1A546 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IsxA1A546 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
IsxA1A546 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IsxA1A546 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.34■□□□□ 0.05
IsxA1A546 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IsxA1A546 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
IsxA1A546 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
IsxA1A546 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
IsxA1A546 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
IsxA1A546 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
IsxA1A546 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
IsxA1A546 Gm12441-201ENSMUST00000121806 588 ntBASIC15.33■□□□□ 0.04
IsxA1A546 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.33■□□□□ 0.04
IsxA1A546 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
IsxA1A546 Gm6365-201ENSMUST00000054711 744 ntBASIC15.33■□□□□ 0.04
IsxA1A546 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
IsxA1A546 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
IsxA1A546 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
IsxA1A546 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
IsxA1A546 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
IsxA1A546 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
IsxA1A546 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
IsxA1A546 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
IsxA1A546 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
IsxA1A546 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
IsxA1A546 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
IsxA1A546 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
IsxA1A546 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
IsxA1A546 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.32■□□□□ 0.04
IsxA1A546 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.32■□□□□ 0.04
IsxA1A546 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.32■□□□□ 0.04
IsxA1A546 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
IsxA1A546 Gm6420-201ENSMUST00000193885 723 ntBASIC15.32■□□□□ 0.04
IsxA1A546 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IsxA1A546 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IsxA1A546 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IsxA1A546 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
IsxA1A546 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
IsxA1A546 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
IsxA1A546 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
IsxA1A546 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
IsxA1A546 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
IsxA1A546 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IsxA1A546 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
IsxA1A546 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IsxA1A546 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms