Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12d-1A0N8R0 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trav12d-1A0N8R0 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12d-1A0N8R0 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12d-1A0N8R0 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12d-1A0N8R0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12d-1A0N8R0 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12d-1A0N8R0 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12d-1A0N8R0 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-1A0N8R0 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-1A0N8R0 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-1A0N8R0 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-1A0N8R0 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav12d-1A0N8R0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-1A0N8R0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav12d-1A0N8R0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav12d-1A0N8R0 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-1A0N8R0 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-1A0N8R0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-1A0N8R0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-1A0N8R0 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
Trav12d-1A0N8R0 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-1A0N8R0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.26□□□□□ -0.29
Trav12d-1A0N8R0 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.26□□□□□ -0.29
Trav12d-1A0N8R0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.26□□□□□ -0.29
Trav12d-1A0N8R0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-1A0N8R0 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-1A0N8R0 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-1A0N8R0 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-1A0N8R0 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-1A0N8R0 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-1A0N8R0 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-1A0N8R0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-1A0N8R0 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav12d-1A0N8R0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-1A0N8R0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-1A0N8R0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-1A0N8R0 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-1A0N8R0 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-1A0N8R0 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12d-1A0N8R0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12d-1A0N8R0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12d-1A0N8R0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12d-1A0N8R0 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav12d-1A0N8R0 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12d-1A0N8R0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav12d-1A0N8R0 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Trav12d-1A0N8R0 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12d-1A0N8R0 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12d-1A0N8R0 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12d-1A0N8R0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12d-1A0N8R0 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12d-1A0N8R0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav12d-1A0N8R0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12d-1A0N8R0 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav12d-1A0N8R0 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Trav12d-1A0N8R0 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Trav12d-1A0N8R0 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12d-1A0N8R0 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav12d-1A0N8R0 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12d-1A0N8R0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12d-1A0N8R0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12d-1A0N8R0 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12d-1A0N8R0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12d-1A0N8R0 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav12d-1A0N8R0 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav12d-1A0N8R0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12d-1A0N8R0 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12d-1A0N8R0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12d-1A0N8R0 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav12d-1A0N8R0 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12d-1A0N8R0 Trmt13-210ENSMUST00000198454 880 ntBASIC13.24□□□□□ -0.29
Trav12d-1A0N8R0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav12d-1A0N8R0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav12d-1A0N8R0 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12d-1A0N8R0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav12d-1A0N8R0 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav12d-1A0N8R0 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12d-1A0N8R0 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.24□□□□□ -0.29
Trav12d-1A0N8R0 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12d-1A0N8R0 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Trav12d-1A0N8R0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-1A0N8R0 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-1A0N8R0 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-1A0N8R0 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-1A0N8R0 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-1A0N8R0 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-1A0N8R0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav12d-1A0N8R0 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-1A0N8R0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-1A0N8R0 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-1A0N8R0 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav12d-1A0N8R0 Gm12085-201ENSMUST00000119263 940 ntBASIC13.23□□□□□ -0.29
Trav12d-1A0N8R0 Gm12441-201ENSMUST00000121806 588 ntBASIC13.23□□□□□ -0.29
Trav12d-1A0N8R0 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-1A0N8R0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav12d-1A0N8R0 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav12d-1A0N8R0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Trav12d-1A0N8R0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-1A0N8R0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms