Protein–RNA interactions for Protein: A0A140T8N7

Igkv6-25, Immunoglobulin kappa chain variable 6-25 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv6-25A0A140T8N7 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Igkv6-25A0A140T8N7 Gm10060-201ENSMUST00000212002 111 ntBASIC15.32■□□□□ 0.04
Igkv6-25A0A140T8N7 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.32■□□□□ 0.04
Igkv6-25A0A140T8N7 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Igkv6-25A0A140T8N7 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Igkv6-25A0A140T8N7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Igkv6-25A0A140T8N7 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Igkv6-25A0A140T8N7 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Igkv6-25A0A140T8N7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Igkv6-25A0A140T8N7 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Igkv6-25A0A140T8N7 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Igkv6-25A0A140T8N7 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Igkv6-25A0A140T8N7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv6-25A0A140T8N7 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.31■□□□□ 0.04
Igkv6-25A0A140T8N7 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv6-25A0A140T8N7 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv6-25A0A140T8N7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Igkv6-25A0A140T8N7 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv6-25A0A140T8N7 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv6-25A0A140T8N7 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv6-25A0A140T8N7 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv6-25A0A140T8N7 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv6-25A0A140T8N7 Gm12497-201ENSMUST00000138778 237 ntBASIC15.31■□□□□ 0.04
Igkv6-25A0A140T8N7 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.31■□□□□ 0.04
Igkv6-25A0A140T8N7 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv6-25A0A140T8N7 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.31■□□□□ 0.04
Igkv6-25A0A140T8N7 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv6-25A0A140T8N7 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv6-25A0A140T8N7 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv6-25A0A140T8N7 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.31■□□□□ 0.04
Igkv6-25A0A140T8N7 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv6-25A0A140T8N7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv6-25A0A140T8N7 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv6-25A0A140T8N7 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.31■□□□□ 0.04
Igkv6-25A0A140T8N7 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv6-25A0A140T8N7 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv6-25A0A140T8N7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv6-25A0A140T8N7 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv6-25A0A140T8N7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv6-25A0A140T8N7 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv6-25A0A140T8N7 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv6-25A0A140T8N7 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv6-25A0A140T8N7 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv6-25A0A140T8N7 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Igkv6-25A0A140T8N7 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv6-25A0A140T8N7 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv6-25A0A140T8N7 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv6-25A0A140T8N7 Gm25406-201ENSMUST00000157599 105 ntBASIC15.3■□□□□ 0.04
Igkv6-25A0A140T8N7 Mir5131-201ENSMUST00000175426 93 ntBASIC15.3■□□□□ 0.04
Igkv6-25A0A140T8N7 Gm4535-201ENSMUST00000182274 558 ntBASIC15.3■□□□□ 0.04
Igkv6-25A0A140T8N7 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.3■□□□□ 0.04
Igkv6-25A0A140T8N7 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.3■□□□□ 0.04
Igkv6-25A0A140T8N7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.3■□□□□ 0.04
Igkv6-25A0A140T8N7 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.3■□□□□ 0.04
Igkv6-25A0A140T8N7 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv6-25A0A140T8N7 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv6-25A0A140T8N7 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Igkv6-25A0A140T8N7 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv6-25A0A140T8N7 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv6-25A0A140T8N7 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv6-25A0A140T8N7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv6-25A0A140T8N7 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv6-25A0A140T8N7 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv6-25A0A140T8N7 Gm10355-201ENSMUST00000097146 517 ntBASIC15.3■□□□□ 0.04
Igkv6-25A0A140T8N7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv6-25A0A140T8N7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv6-25A0A140T8N7 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv6-25A0A140T8N7 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv6-25A0A140T8N7 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Igkv6-25A0A140T8N7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv6-25A0A140T8N7 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv6-25A0A140T8N7 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv6-25A0A140T8N7 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv6-25A0A140T8N7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv6-25A0A140T8N7 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Igkv6-25A0A140T8N7 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Igkv6-25A0A140T8N7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Igkv6-25A0A140T8N7 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Igkv6-25A0A140T8N7 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.29■□□□□ 0.04
Igkv6-25A0A140T8N7 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Igkv6-25A0A140T8N7 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Igkv6-25A0A140T8N7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Igkv6-25A0A140T8N7 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Igkv6-25A0A140T8N7 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Igkv6-25A0A140T8N7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Igkv6-25A0A140T8N7 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.29■□□□□ 0.04
Igkv6-25A0A140T8N7 Gm25990-201ENSMUST00000102440 86 ntBASIC15.29■□□□□ 0.04
Igkv6-25A0A140T8N7 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Igkv6-25A0A140T8N7 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Igkv6-25A0A140T8N7 Gm4459-201ENSMUST00000118750 468 ntBASIC15.29■□□□□ 0.04
Igkv6-25A0A140T8N7 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Igkv6-25A0A140T8N7 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Igkv6-25A0A140T8N7 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.29■□□□□ 0.04
Igkv6-25A0A140T8N7 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Igkv6-25A0A140T8N7 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Igkv6-25A0A140T8N7 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Igkv6-25A0A140T8N7 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Igkv6-25A0A140T8N7 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Igkv6-25A0A140T8N7 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.29■□□□□ 0.04
Igkv6-25A0A140T8N7 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms