Protein–RNA interactions for Protein: A0A0N4SV92

Duxf3, Double homeobox family member 3, mousemouse

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Duxf3A0A0N4SV92 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Duxf3A0A0N4SV92 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC20.51■□□□□ 0.87
Duxf3A0A0N4SV92 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Duxf3A0A0N4SV92 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.51■□□□□ 0.87
Duxf3A0A0N4SV92 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.51■□□□□ 0.87
Duxf3A0A0N4SV92 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.51■□□□□ 0.87
Duxf3A0A0N4SV92 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Duxf3A0A0N4SV92 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Duxf3A0A0N4SV92 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Duxf3A0A0N4SV92 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Duxf3A0A0N4SV92 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Duxf3A0A0N4SV92 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Duxf3A0A0N4SV92 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Duxf3A0A0N4SV92 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Duxf3A0A0N4SV92 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC20.5■□□□□ 0.87
Duxf3A0A0N4SV92 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Duxf3A0A0N4SV92 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Duxf3A0A0N4SV92 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Duxf3A0A0N4SV92 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Duxf3A0A0N4SV92 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Duxf3A0A0N4SV92 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC20.5■□□□□ 0.87
Duxf3A0A0N4SV92 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Duxf3A0A0N4SV92 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Duxf3A0A0N4SV92 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Duxf3A0A0N4SV92 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Duxf3A0A0N4SV92 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Duxf3A0A0N4SV92 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Duxf3A0A0N4SV92 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC20.5■□□□□ 0.87
Duxf3A0A0N4SV92 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Duxf3A0A0N4SV92 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Duxf3A0A0N4SV92 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Duxf3A0A0N4SV92 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Duxf3A0A0N4SV92 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.49■□□□□ 0.87
Duxf3A0A0N4SV92 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Duxf3A0A0N4SV92 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Duxf3A0A0N4SV92 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.49■□□□□ 0.87
Duxf3A0A0N4SV92 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Duxf3A0A0N4SV92 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Duxf3A0A0N4SV92 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Duxf3A0A0N4SV92 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Duxf3A0A0N4SV92 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Duxf3A0A0N4SV92 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Duxf3A0A0N4SV92 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Duxf3A0A0N4SV92 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Duxf3A0A0N4SV92 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Duxf3A0A0N4SV92 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Duxf3A0A0N4SV92 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Duxf3A0A0N4SV92 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Duxf3A0A0N4SV92 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Duxf3A0A0N4SV92 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Duxf3A0A0N4SV92 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Duxf3A0A0N4SV92 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Duxf3A0A0N4SV92 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Duxf3A0A0N4SV92 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.48■□□□□ 0.87
Duxf3A0A0N4SV92 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.48■□□□□ 0.87
Duxf3A0A0N4SV92 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Duxf3A0A0N4SV92 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Duxf3A0A0N4SV92 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Duxf3A0A0N4SV92 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Duxf3A0A0N4SV92 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Duxf3A0A0N4SV92 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Duxf3A0A0N4SV92 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Duxf3A0A0N4SV92 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Duxf3A0A0N4SV92 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC20.47■□□□□ 0.87
Duxf3A0A0N4SV92 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
Duxf3A0A0N4SV92 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Duxf3A0A0N4SV92 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Duxf3A0A0N4SV92 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC20.47■□□□□ 0.87
Duxf3A0A0N4SV92 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
Duxf3A0A0N4SV92 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Duxf3A0A0N4SV92 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Duxf3A0A0N4SV92 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Duxf3A0A0N4SV92 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Duxf3A0A0N4SV92 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.47■□□□□ 0.87
Duxf3A0A0N4SV92 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Duxf3A0A0N4SV92 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Duxf3A0A0N4SV92 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Duxf3A0A0N4SV92 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC20.47■□□□□ 0.87
Duxf3A0A0N4SV92 AC093043.3-201ENSMUST00000226531 2273 ntBASIC20.47■□□□□ 0.87
Duxf3A0A0N4SV92 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Duxf3A0A0N4SV92 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC20.46■□□□□ 0.87
Duxf3A0A0N4SV92 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Duxf3A0A0N4SV92 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Duxf3A0A0N4SV92 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Duxf3A0A0N4SV92 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Duxf3A0A0N4SV92 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Duxf3A0A0N4SV92 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Duxf3A0A0N4SV92 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Duxf3A0A0N4SV92 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Duxf3A0A0N4SV92 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Duxf3A0A0N4SV92 Gm6433-201ENSMUST00000118634 875 ntBASIC20.46■□□□□ 0.87
Duxf3A0A0N4SV92 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Duxf3A0A0N4SV92 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC20.46■□□□□ 0.87
Duxf3A0A0N4SV92 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Duxf3A0A0N4SV92 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.46■□□□□ 0.87
Duxf3A0A0N4SV92 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Duxf3A0A0N4SV92 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Duxf3A0A0N4SV92 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Duxf3A0A0N4SV92 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC20.46■□□□□ 0.87
Duxf3A0A0N4SV92 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms