Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-4A0A0G2JG01 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav13n-4A0A0G2JG01 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-4A0A0G2JG01 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-4A0A0G2JG01 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
Trav13n-4A0A0G2JG01 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-4A0A0G2JG01 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-4A0A0G2JG01 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Trav13n-4A0A0G2JG01 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-4A0A0G2JG01 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.38□□□□□ -0.27
Trav13n-4A0A0G2JG01 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-4A0A0G2JG01 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-4A0A0G2JG01 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Trav13n-4A0A0G2JG01 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-4A0A0G2JG01 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-4A0A0G2JG01 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-4A0A0G2JG01 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-4A0A0G2JG01 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-4A0A0G2JG01 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.38□□□□□ -0.27
Trav13n-4A0A0G2JG01 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-4A0A0G2JG01 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Trav13n-4A0A0G2JG01 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-4A0A0G2JG01 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav13n-4A0A0G2JG01 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-4A0A0G2JG01 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-4A0A0G2JG01 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-4A0A0G2JG01 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-4A0A0G2JG01 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-4A0A0G2JG01 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-4A0A0G2JG01 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-4A0A0G2JG01 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-4A0A0G2JG01 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-4A0A0G2JG01 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-4A0A0G2JG01 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-4A0A0G2JG01 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-4A0A0G2JG01 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-4A0A0G2JG01 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-4A0A0G2JG01 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-4A0A0G2JG01 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-4A0A0G2JG01 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-4A0A0G2JG01 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-4A0A0G2JG01 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-4A0A0G2JG01 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trav13n-4A0A0G2JG01 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-4A0A0G2JG01 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav13n-4A0A0G2JG01 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-4A0A0G2JG01 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-4A0A0G2JG01 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trav13n-4A0A0G2JG01 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-4A0A0G2JG01 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Trav13n-4A0A0G2JG01 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-4A0A0G2JG01 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav13n-4A0A0G2JG01 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-4A0A0G2JG01 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-4A0A0G2JG01 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-4A0A0G2JG01 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-4A0A0G2JG01 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-4A0A0G2JG01 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav13n-4A0A0G2JG01 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-4A0A0G2JG01 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav13n-4A0A0G2JG01 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-4A0A0G2JG01 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-4A0A0G2JG01 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav13n-4A0A0G2JG01 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trav13n-4A0A0G2JG01 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trav13n-4A0A0G2JG01 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Trav13n-4A0A0G2JG01 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav13n-4A0A0G2JG01 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Trav13n-4A0A0G2JG01 Gm16061-201ENSMUST00000122167 857 ntBASIC13.36□□□□□ -0.27
Trav13n-4A0A0G2JG01 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-4A0A0G2JG01 Gm25016-201ENSMUST00000158399 131 ntBASIC13.36□□□□□ -0.27
Trav13n-4A0A0G2JG01 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav13n-4A0A0G2JG01 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav13n-4A0A0G2JG01 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-4A0A0G2JG01 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.36□□□□□ -0.27
Trav13n-4A0A0G2JG01 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-4A0A0G2JG01 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav13n-4A0A0G2JG01 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.36□□□□□ -0.27
Trav13n-4A0A0G2JG01 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-4A0A0G2JG01 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-4A0A0G2JG01 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-4A0A0G2JG01 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-4A0A0G2JG01 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.36□□□□□ -0.27
Trav13n-4A0A0G2JG01 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.36□□□□□ -0.27
Trav13n-4A0A0G2JG01 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-4A0A0G2JG01 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-4A0A0G2JG01 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-4A0A0G2JG01 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Trav13n-4A0A0G2JG01 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Trav13n-4A0A0G2JG01 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-4A0A0G2JG01 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-4A0A0G2JG01 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-4A0A0G2JG01 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav13n-4A0A0G2JG01 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-4A0A0G2JG01 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-4A0A0G2JG01 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-4A0A0G2JG01 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav13n-4A0A0G2JG01 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav13n-4A0A0G2JG01 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-4A0A0G2JG01 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms